RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 STXBP3O00186 592 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 MYL3P08590 195 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 NKX3-2P78367 333 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 SEMA3FQ13275 785 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
CSTF1-208ENST00000613138 C8orf34Q49A92 452 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 HABP4Q5JVS0 413 aaKnown RBP14.6□□□□□ -0.07
CSTF1-208ENST00000613138 SCFD2Q8WU76 684 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 IWS1Q96ST2 819 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 SPC25Q9HBM1 224 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 TMEM260Q9NX78 707 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 CYP46A1Q9Y6A2 500 aa14.6□□□□□ -0.07
CSTF1-208ENST00000613138 MOXD2PA6NHM9 499 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 ARHGAP1Q07960 439 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 TTLL4Q14679 1199 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 NTRK3Q16288 839 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 PKN1Q16512 942 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 VSIG10LQ86VR7 867 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 PCSK9Q8NBP7 692 aaKnown RBP14.59□□□□□ -0.07
CSTF1-208ENST00000613138 SMARCC2Q8TAQ2 1214 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 AFG1LQ8WV93 481 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 GDF15Q99988 308 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 PSTPIP2Q9H939 334 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 PDRG1Q9NUG6 133 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 DDX41Q9UJV9 622 aaKnown RBP14.59□□□□□ -0.07
CSTF1-208ENST00000613138 SZT2Q5T011 3432 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 FRMPD4Q14CM0 1322 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 LAMA2P24043 3122 aaKnown RBP14.59□□□□□ -0.07
CSTF1-208ENST00000613138 NID2Q14112 1375 aa14.59□□□□□ -0.07
CSTF1-208ENST00000613138 SCN5AQ14524 2016 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 EPB41L2O43491 1005 aaKnown RBP14.58□□□□□ -0.08
CSTF1-208ENST00000613138 EIF3JO75822 258 aaKnown RBP14.58□□□□□ -0.08
CSTF1-208ENST00000613138 CDK7P50613 346 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 NAPAP54920 295 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 CHMP4BP1P59074 171 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 FAAP100Q0VG06 881 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 FBXL16Q8N461 479 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 GLT1D1Q96MS3 346 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 TM6SF1Q9BZW5 370 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 MRVI1Q9Y6F6 885 aa14.58□□□□□ -0.08
CSTF1-208ENST00000613138 A0A0U1RQG5 324 aaPredicted RBP14.57□□□□□ -0.08
CSTF1-208ENST00000613138 ARVCFO00192 962 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 LARGE1O95461 756 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 UBA1P22314 1058 aaKnown RBP14.57□□□□□ -0.08
CSTF1-208ENST00000613138 CCND2P30279 289 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 EVCP57679 992 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 PURAQ00577 322 aaKnown RBP14.57□□□□□ -0.08
CSTF1-208ENST00000613138 C1orf53Q5VUE5 145 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 BADQ92934 168 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 CUL5Q93034 780 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 AIFM3Q96NN9 605 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 MPHOSPH6Q99547 160 aaKnown RBP14.57□□□□□ -0.08
CSTF1-208ENST00000613138 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 MAF1Q9H063 256 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 TRPV6Q9H1D0 765 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 MAP3K20Q9NYL2 800 aaKnown RBP14.57□□□□□ -0.08
CSTF1-208ENST00000613138 TPCN1Q9ULQ1 816 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 Q9Y3F1 56 aa14.57□□□□□ -0.08
CSTF1-208ENST00000613138 B4DLN1 442 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 PIK3CDO00329 1044 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 SOX1O00570 391 aaPredicted RBP14.56□□□□□ -0.08
CSTF1-208ENST00000613138 GH1P01241 217 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 MMP3P08254 477 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 CLTBP09497 229 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 ZNF286BP0CG31 522 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 MRPL12P52815 198 aaKnown RBP14.56□□□□□ -0.08
CSTF1-208ENST00000613138 RCAN1P53805 252 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 AK2P54819 239 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 ITGA7Q13683 1181 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 PFKFB3Q16875 520 aaPredicted RBP14.56□□□□□ -0.08
CSTF1-208ENST00000613138 FAM126BQ8IXS8 530 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 RASGRP4Q8TDF6 673 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 UIMC1Q96RL1 719 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 BARHL2Q9NY43 387 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 PKD2L1Q9P0L9 805 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 PCDHA6Q9UN73 950 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 PCDHA8Q9Y5H6 950 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 ELP1O95163 1332 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 UMODL1Q5DID0 1318 aa14.56□□□□□ -0.08
CSTF1-208ENST00000613138 SMCO2A6NFE2 343 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 A6NJR5 290 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 NKRFO15226 690 aaKnown RBP eCLIP14.55□□□□□ -0.08
CSTF1-208ENST00000613138 GGPS1O95749 300 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 SCG2P13521 617 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 EPHB4P54760 987 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 TRAF1Q13077 416 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 JAKMIP3Q5VZ66 844 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 ANKRD33Q7Z3H0 272 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 SAMD3Q8N6K7 520 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 SLC43A3Q8NBI5 491 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 CYP2W1Q8TAV3 490 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 KAT2BQ92831 832 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 PPP1R12CQ9BZL4 782 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 TRMT13Q9NUP7 481 aaKnown RBP14.55□□□□□ -0.08
CSTF1-208ENST00000613138 TMEM39AQ9NV64 488 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 VPS54Q9P1Q0 977 aa14.55□□□□□ -0.08
CSTF1-208ENST00000613138 PRPF3O43395 683 aaKnown RBP14.54□□□□□ -0.08
CSTF1-208ENST00000613138 B4GALT4O60513 344 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms