RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 TSPYL2Q9H2G4 693 aaPredicted RBP20.48■□□□□ 0.87
MUC1-224ENST00000611577 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
MUC1-224ENST00000611577 POLR3EQ9NVU0 708 aa20.48■□□□□ 0.87
MUC1-224ENST00000611577 ADD3Q9UEY8 706 aaKnown RBP20.48■□□□□ 0.87
MUC1-224ENST00000611577 SEC24BO95487 1268 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 PFKMP08237 780 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 MYL3P08590 195 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 SUPT20HL2P0C7V6 817 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 CALM1P0DP23 149 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 CALM2P0DP24 149 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 CALM3P0DP25 149 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 CYP2C9P11712 490 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 RPS6KB1P23443 525 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 KIF5BP33176 963 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 ALDH5A1P51649 535 aaPredicted RBP20.47■□□□□ 0.87
MUC1-224ENST00000611577 EXOSC10Q01780 885 aaKnown RBP20.47■□□□□ 0.87
MUC1-224ENST00000611577 BAATQ14032 418 aaPredicted RBP20.47■□□□□ 0.87
MUC1-224ENST00000611577 COL9A3Q14050 684 aaPredicted RBP20.47■□□□□ 0.87
MUC1-224ENST00000611577 TTLL4Q14679 1199 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 GRM4Q14833 912 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 BTNL9Q6UXG8 535 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 VWCEQ96DN2 955 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 MYL10Q9BUA6 226 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 WDR11Q9BZH6 1224 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 UBA5Q9GZZ9 404 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 RANBP17Q9H2T7 1088 aaKnown RBP20.47■□□□□ 0.87
MUC1-224ENST00000611577 CYP46A1Q9Y6A2 500 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 MYH6P13533 1939 aa20.47■□□□□ 0.87
MUC1-224ENST00000611577 KLRF2D3W0D1 207 aa20.46■□□□□ 0.87
MUC1-224ENST00000611577 NFIBO00712 420 aa20.46■□□□□ 0.87
MUC1-224ENST00000611577 CPT1AP50416 773 aa20.46■□□□□ 0.87
MUC1-224ENST00000611577 Q6ZUG5 572 aa20.46■□□□□ 0.87
MUC1-224ENST00000611577 DEFB128Q7Z7B8 93 aa20.46■□□□□ 0.87
MUC1-224ENST00000611577 VAT1LQ9HCJ6 419 aa20.46■□□□□ 0.87
MUC1-224ENST00000611577 XIRP2A4UGR9 3374 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 PTPDC1A2A3K4 754 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 ANAPC15P60006 121 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 PURAQ00577 322 aaKnown RBP20.45■□□□□ 0.86
MUC1-224ENST00000611577 FAM47CQ5HY64 1035 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 SLC30A10Q6XR72 485 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 OR6J1Q8NGC5 347 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 CPVLQ9H3G5 476 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 RAPGEFL1Q9UHV5 662 aa20.45■□□□□ 0.86
MUC1-224ENST00000611577 RXRAP19793 462 aa20.44■□□□□ 0.86
MUC1-224ENST00000611577 TROAPQ12815 778 aa20.44■□□□□ 0.86
MUC1-224ENST00000611577 SKIV2LQ15477 1246 aaKnown RBP20.44■□□□□ 0.86
MUC1-224ENST00000611577 SGMS1Q86VZ5 419 aa20.44■□□□□ 0.86
MUC1-224ENST00000611577 RAB11FIP4Q86YS3 637 aa20.44■□□□□ 0.86
MUC1-224ENST00000611577 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
MUC1-224ENST00000611577 MTG1Q9BT17 334 aaPredicted RBP20.44■□□□□ 0.86
MUC1-224ENST00000611577 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
MUC1-224ENST00000611577 TM6SF1Q9BZW5 370 aa20.44■□□□□ 0.86
MUC1-224ENST00000611577 ZSWIM6Q9HCJ5 1215 aa20.44■□□□□ 0.86
MUC1-224ENST00000611577 MAD2L2Q9UI95 211 aa20.44■□□□□ 0.86
MUC1-224ENST00000611577 LOC102724159A0A0B4J2E5 919 aa20.43■□□□□ 0.86
MUC1-224ENST00000611577 KLF18A0A0U1RQI7 1052 aa20.43■□□□□ 0.86
MUC1-224ENST00000611577 RBM47A0AV96 593 aaKnown RBP20.43■□□□□ 0.86
MUC1-224ENST00000611577 CA3P07451 260 aa20.43■□□□□ 0.86
MUC1-224ENST00000611577 CALML3P27482 149 aa20.43■□□□□ 0.86
MUC1-224ENST00000611577 PWP2Q15269 919 aaKnown RBP20.43■□□□□ 0.86
MUC1-224ENST00000611577 ADGRF4Q8IZF3 695 aa20.43■□□□□ 0.86
MUC1-224ENST00000611577 BRF1Q92994 677 aa20.43■□□□□ 0.86
MUC1-224ENST00000611577 NECAB3Q96P71 396 aaPredicted RBP20.43■□□□□ 0.86
MUC1-224ENST00000611577 MAP3K14Q99558 947 aa20.43■□□□□ 0.86
MUC1-224ENST00000611577 PNMA2Q9UL42 364 aa20.43■□□□□ 0.86
MUC1-224ENST00000611577 REV3LO60673 3130 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 PALM3A6NDB9 673 aaPredicted RBP20.42■□□□□ 0.86
MUC1-224ENST00000611577 ZBTB43O43298 467 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 ACTN1P12814 892 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 GNAQP50148 359 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 TFF2Q03403 129 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 PDE4DQ08499 809 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 PPP2R5BQ15173 497 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 CDC37Q16543 378 aaPredicted RBP20.42■□□□□ 0.86
MUC1-224ENST00000611577 NBPF20Q3BBV1 942 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 BRDTQ58F21 947 aaPredicted RBP20.42■□□□□ 0.86
MUC1-224ENST00000611577 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 PPP1R13LQ8WUF5 828 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 CERS4Q9HA82 394 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 PDRG1Q9NUG6 133 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 TRANK1O15050 2925 aa20.42■□□□□ 0.86
MUC1-224ENST00000611577 RFXAPO00287 272 aa20.41■□□□□ 0.86
MUC1-224ENST00000611577 GTPBP6O43824 516 aaPredicted RBP20.41■□□□□ 0.86
MUC1-224ENST00000611577 RFC2P35250 354 aa20.41■□□□□ 0.86
MUC1-224ENST00000611577 APOBRQ0VD83 1088 aa20.41■□□□□ 0.86
MUC1-224ENST00000611577 RNF207Q6ZRF8 634 aa20.41■□□□□ 0.86
MUC1-224ENST00000611577 CLEC4DQ8WXI8 215 aa20.41■□□□□ 0.86
MUC1-224ENST00000611577 SLC9A7Q96T83 725 aa20.41■□□□□ 0.86
MUC1-224ENST00000611577 MPHOSPH6Q99547 160 aaKnown RBP20.41■□□□□ 0.86
MUC1-224ENST00000611577 GOLGA8AA7E2F4 631 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 GOLGA8BA8MQT2 603 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 SCN5AQ14524 2016 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 AAK1Q2M2I8 961 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 USH1GQ495M9 461 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 HOMER1Q86YM7 354 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 FANCBQ8NB91 859 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 RETREG2Q8NC44 543 aa20.4■□□□□ 0.86
MUC1-224ENST00000611577 LZTS2Q9BRK4 669 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms