RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 GRIN2DO15399 1336 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 MINDY4BA8MYZ0 360 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 POTEB2H3BUK9 544 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 ADCY6O43306 1168 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 PRC1O43663 620 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 GH1P01241 217 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 SMPD1P17405 629 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 EN2P19622 333 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-219ENST00000611457 SEMA3FQ13275 785 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 PPP4R3AQ6IN85 833 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 SAMD11Q96NU1 681 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 CEP89Q96ST8 783 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 PDCL3Q9H2J4 239 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 FBXO28Q9NVF7 368 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 IGLV3-22A0A075B6J6 115 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 GCFC2P16383 781 aaKnown RBP8.27□□□□□ -1.09
CBWD1-219ENST00000611457 KCNA2P16389 499 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 FAM47AQ5JRC9 791 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 MFSD5Q6N075 450 aa8.27□□□□□ -1.09
CBWD1-219ENST00000611457 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-219ENST00000611457 B4E1Z4 1266 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 KLRF2D3W0D1 207 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 MPHOSPH10O00566 681 aaKnown RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 TPM2P07951 284 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 MMP3P08254 477 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 SUPT20HL2P0C7V6 817 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 TTLL4Q14679 1199 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 LRRC26Q2I0M4 334 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 NAALADL2Q58DX5 795 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 SLC30A10Q6XR72 485 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 NME8Q8N427 588 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 SRBD1Q8N5C6 995 aaKnown RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 SH3TC2Q8TF17 1288 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 TMEM174Q8WUU8 243 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 RRP36Q96EU6 259 aaKnown RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 COL20A1Q9P218 1284 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 PLXNA4Q9HCM2 1894 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 MEIS1O00470 390 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 PPFIA4O75335 1185 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 PPIGQ13427 754 aaKnown RBP eCLIP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 STXBP2Q15833 593 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 PSRC1Q6PGN9 363 aaPredicted RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 METTL7BQ6UX53 244 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 USP38Q8NB14 1042 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 RIT2Q99578 217 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 NFKBIZQ9BYH8 718 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 TSKSQ9UJT2 592 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 CNPY2Q9Y2B0 182 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 TLR3O15455 904 aaKnown RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 EDIL3O43854 480 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 CLTBP09497 229 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 FAAP100Q0VG06 881 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 NEDD9Q14511 834 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 ZNF746Q6NUN9 644 aaPredicted RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 CCDC144CPQ8IYA2 1237 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 SMAP1Q8IYB5 467 aaPredicted RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 CCDC148Q8NFR7 591 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 NEK9Q8TD19 979 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 KAT2BQ92831 832 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 SLC5A5Q92911 643 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 PHF20Q9BVI0 1012 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 XPNPEP3Q9NQH7 507 aa8.26□□□□□ -1.09
CBWD1-219ENST00000611457 ARIH1Q9Y4X5 557 aaPredicted RBP8.26□□□□□ -1.09
CBWD1-219ENST00000611457 ERICH2A1L162 156 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 TRIM6-TRIM34B2RNG4 842 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 C5orf67F2Z3F1 127 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 GCOM1H8Y6P7 765 aaPredicted RBP8.25□□□□□ -1.09
CBWD1-219ENST00000611457 POU2F2P09086 479 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 POLR2MP0CAP2 368 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 RTP1P59025 263 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 RPS6P62753 249 aaKnown RBP8.25□□□□□ -1.09
CBWD1-219ENST00000611457 TRIM32Q13049 653 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 ECM1Q16610 540 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 EXOC8Q8IYI6 725 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 NOC4LQ9BVI4 516 aaKnown RBP8.25□□□□□ -1.09
CBWD1-219ENST00000611457 RNF208Q9H0X6 261 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 RAVER2Q9HCJ3 691 aaKnown RBP8.25□□□□□ -1.09
CBWD1-219ENST00000611457 STK39Q9UEW8 545 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 PHLPP2Q6ZVD8 1323 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 KMT2EQ8IZD2 1858 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 IGKV6-21A0A0C4DH24 114 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 FSD2A1L4K1 749 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 DHX16O60231 1041 aaKnown RBP8.25□□□□□ -1.09
CBWD1-219ENST00000611457 NMT2O60551 498 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 MCM2P49736 904 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 CDC42EP1Q00587 391 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 HABP4Q5JVS0 413 aaKnown RBP8.25□□□□□ -1.09
CBWD1-219ENST00000611457 SERINC5Q86VE9 423 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 C16orf70Q9BSU1 422 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 IL23AQ9NPF7 189 aa8.25□□□□□ -1.09
CBWD1-219ENST00000611457 MTCL1Q9Y4B5 1905 aaKnown RBP8.25□□□□□ -1.09
CBWD1-219ENST00000611457 GAS2O43903 313 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 XRCC6P12956 609 aaKnown RBP eCLIP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 HTRA4P83105 476 aaPredicted RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 POU5F1Q01860 360 aaKnown RBP8.24□□□□□ -1.09
CBWD1-219ENST00000611457 TNFAIP2Q03169 654 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 RASGRP2Q7LDG7 609 aa8.24□□□□□ -1.09
CBWD1-219ENST00000611457 DPP9Q86TI2 863 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms