RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	TRIM60	Q495X7	471 aa		18.51	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	NCLN	Q969V3	563 aa		18.51	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	BASP1	P80723	227 aa	Known RBP	18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ACBD5	Q5T8D3	534 aa	Predicted RBP	18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	FNDC3A	Q9Y2H6	1198 aa	Known RBP	18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	TNR	Q92752	1358 aa		18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	TRPC5	Q9UL62	973 aa	Predicted RBP	18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CFAP36	Q96G28	342 aa		18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	MAGI1	Q96QZ7	1491 aa	Predicted RBP	18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	EXOC8	Q8IYI6	725 aa		18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	DHX38	Q92620	1227 aa	Known RBP	18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ALKBH8	Q96BT7	664 aa	Known RBP	18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	PPIP5K2	O43314	1243 aa		18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	MED7	O43513	233 aa		18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ESRRA	P11474	423 aa	Predicted RBP	18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	PML	P29590	882 aa		18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	MAGEF1	Q9HAY2	307 aa		18.5	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	NFKBIA	P25963	317 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	PLTP	P55058	493 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	KCTD6	Q8NC69	237 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CACTIN	Q8WUQ7	758 aa	Known RBP	18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	GJA10	Q969M2	543 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SUN2	Q9UH99	717 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ATP8A1	Q9Y2Q0	1164 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	HNRNPDL	O14979	420 aa	Known RBP	18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	OCM2	P0CE71	109 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	OCM	P0CE72	109 aa	Predicted RBP	18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	HLA-DPA1	P20036	260 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	TAC1	P20366	129 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	COPB1	P53618	953 aa	Known RBP	18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SNX19	Q92543	992 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	RABGGTA	Q92696	567 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	JPH2	Q9BR39	696 aa	Predicted RBP	18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	KIF19	Q2TAC6	998 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	GRAMD1B	Q3KR37	738 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ODR4	Q5SWX8	454 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	C16orf87	Q6PH81	154 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	DACH2	Q96NX9	599 aa		18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CDV3	Q9UKY7	258 aa	Known RBP	18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ZNF215	Q9UL58	517 aa	Predicted RBP	18.49	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SYCE1L	A8MT33	242 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CNOT6L	Q96LI5	555 aa	Known RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	NACC1	Q96RE7	527 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	YY1AP1	Q9H869	796 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ACTR5	Q9H9F9	607 aa	Predicted RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	EPB41L5	Q9HCM4	733 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CHCHD3	Q9NX63	227 aa	Known RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	RRP15	Q9Y3B9	282 aa	Known RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CTNND1	O60716	968 aa	Known RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	POLA2	Q14181	598 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	LRRC8A	Q8IWT6	810 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ZNF274	Q96GC6	653 aa	Predicted RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CDK13	Q14004	1512 aa	Known RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	TMCO5A	Q8N6Q1	288 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	HINFP	Q9BQA5	517 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	COG4	Q9H9E3	785 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SEPT9	Q9UHD8	586 aa	Predicted RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	AKT3	Q9Y243	479 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	DYNLT1	P63172	113 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SLMAP	Q14BN4	828 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	NDUFAF2	Q8N183	169 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ANKRD13C	Q8N6S4	541 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SPATA17	Q96L03	361 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	LMBRD1	Q9NUN5	540 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CDC23	Q9UJX2	597 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	MAP3K1	Q13233	1512 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ARHGEF37	A1IGU5	675 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ESRRB	O95718	433 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	PSMC2	P35998	433 aa	Known RBP	18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	PTK2B	Q14289	1009 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	TTLL7	Q6ZT98	887 aa		18.48	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	GOLGA8S	H3BPF8	625 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	E2F6	O75461	281 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	KCNA4	P22459	653 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	CMA1	P23946	247 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	RETREG2	Q8NC44	543 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	INTU	Q9ULD6	942 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	PGRMC1	O00264	195 aa	Known RBP	18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ZBTB7B	O15156	539 aa	Predicted RBP	18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ZNF790	Q6PG37	636 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	MRPL47	Q9HD33	250 aa	Known RBP	18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	FANCL	Q9NW38	375 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ZNF212	Q9UDV6	495 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SNAPC4	Q5SXM2	1469 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ATP8B1	O43520	1251 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SEC24B	O95487	1268 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	TRIM45	Q9H8W5	580 aa	Predicted RBP	18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	IQANK1	A0A1B0GTG1	560 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SPAG7	O75391	227 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	DNAJC24	Q6P3W2	148 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	GANC	Q8TET4	914 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	MAML1	Q92585	1016 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	EYA1	Q99502	592 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	MMTAG2	Q9BU76	263 aa	Known RBP	18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SNX5	Q9Y5X3	404 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ZMYM6	O95789	1325 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	SCG2	P13521	617 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	ANXA13	P27216	316 aa		18.47	■□□□□ 0.55
ZSWIM8-223	ENST00000605216	KRT27	Q7Z3Y8	459 aa		18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms