RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 ZNF354CQ86Y25 554 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 SMARCC2Q8TAQ2 1214 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 MDM1Q8TC05 714 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 AFAP1L1Q8TED9 768 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 SLC13A1Q9BZW2 595 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZNF112Q9UJU3 913 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZNF711Q9Y462 761 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 AFG3L2Q9Y4W6 797 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 INSRP06213 1382 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 NRKQ7Z2Y5 1582 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 TRAV6A0A075B6T7 132 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 PPP1R3GB7ZBB8 358 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZBTB39O15060 712 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 CAPN3P20807 821 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 HNF1BP35680 557 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 CHKAP35790 457 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 HADHAP40939 763 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 RAD52P43351 418 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 CDK17Q00537 523 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 CREB3L3Q68CJ9 461 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 SHQ1Q6PI26 577 aaKnown RBP6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZNF600Q6ZNG1 722 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 WDR63Q8IWG1 891 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 PPM1NQ8N819 430 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 FERD3LQ96RJ6 166 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 SRPK1Q96SB4 655 aaKnown RBP6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 SMAD5Q99717 465 aaKnown RBP6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 C7orf25Q9BPX7 421 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 THUMPD2Q9BTF0 503 aaKnown RBP6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 MRPL9Q9BYD2 267 aaKnown RBP6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 B3GNT4Q9C0J1 378 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 CLSTN2Q9H4D0 955 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 ANKEF1Q9NU02 776 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 MCM8Q9UJA3 840 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 STRIP2Q9ULQ0 834 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 PCDHGC5Q9Y5F6 944 aa6.44□□□□□ -1.38
COL4A3BP-207ENST00000604926 ESYT3A0FGR9 886 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 STMND1H3BQB6 276 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 CYP27B1O15528 508 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 TTI1O43156 1089 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 TADA3O75528 432 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 SLC34A2O95436 690 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 CPP00450 1065 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZFXP17010 805 aaPredicted RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 RXRGP48443 463 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 DPYSQ14117 519 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 MORC3Q14149 939 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZNF700Q9H0M5 742 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 NRDE2Q9H7Z3 1164 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 SNX4O95219 450 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 IFIT1P09914 478 aaKnown RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 MCM5P33992 734 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 CTCFP49711 727 aaPredicted RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 BBOF1Q8ND07 529 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 IL17RDQ8NFM7 739 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 ALKBH8Q96BT7 664 aaKnown RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 RBM41Q96IZ5 413 aaKnown RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 TTC25Q96NG3 672 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 BARD1Q99728 777 aaKnown RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 A1CFQ9NQ94 594 aaKnown RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZNF624Q9P2J8 865 aaPredicted RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 MCF2LO15068 1137 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZBTB43O43298 467 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 B4GALT4O60513 344 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 TOM1O60784 492 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 TMCC2O75069 709 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 COBLO75128 1261 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 TGDSO95455 350 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 FGRP09769 529 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 SPATA1Q5VX52 437 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 MZT2AQ6P582 158 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 OTOP3Q7RTS5 596 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 NLRP10Q86W26 655 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 ATXN2LQ8WWM7 1075 aaKnown RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 CUL5Q93034 780 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 GMCL1Q96IK5 515 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 PARVGQ9HBI0 331 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 LUC7LQ9NQ29 371 aaKnown RBP6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 TBC1D22BQ9NU19 505 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 RTEL1Q9NZ71 1219 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 INPP5FQ9Y2H2 1132 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 PTPRUQ92729 1446 aa6.43□□□□□ -1.38
COL4A3BP-207ENST00000604926 ATP8B1O43520 1251 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 ZBED4O75132 1171 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 PRKAR2AP13861 404 aaKnown RBP6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 FGFR4P22455 802 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 RFC5P40937 340 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 ATP5OP48047 213 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 RELQ04864 619 aaPredicted RBP6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 OASLQ15646 514 aaKnown RBP6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 KRT71Q3SY84 523 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 SETMARQ53H47 684 aaPredicted RBP6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 ADALQ6DHV7 355 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 PDE12Q6L8Q7 609 aaKnown RBP6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 DNAJB7Q7Z6W7 309 aaPredicted RBP6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 RNF10Q8N5U6 811 aaKnown RBP6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 EXOC6Q8TAG9 804 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 TBCBQ99426 244 aa6.42□□□□□ -1.38
COL4A3BP-207ENST00000604926 NCOA5Q9HCD5 579 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms