RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 RXRAP19793 462 aa30.37■■■□□ 2.45
PPFIA3-205ENST00000602509 CCND2P30279 289 aa30.37■■■□□ 2.45
PPFIA3-205ENST00000602509 SMAD3P84022 425 aaKnown RBP30.37■■■□□ 2.45
PPFIA3-205ENST00000602509 PGM5Q15124 567 aa30.37■■■□□ 2.45
PPFIA3-205ENST00000602509 VSIG10LQ86VR7 867 aa30.37■■■□□ 2.45
PPFIA3-205ENST00000602509 DDX41Q9UJV9 622 aaKnown RBP30.37■■■□□ 2.45
PPFIA3-205ENST00000602509 MYH6P13533 1939 aa30.37■■■□□ 2.45
PPFIA3-205ENST00000602509 PLEKHA8P1O95397 391 aa30.36■■■□□ 2.45
PPFIA3-205ENST00000602509 CHMP4BP1P59074 171 aa30.36■■■□□ 2.45
PPFIA3-205ENST00000602509 NFRKBQ6P4R8 1299 aa30.36■■■□□ 2.45
PPFIA3-205ENST00000602509 KCNV1Q6PIU1 500 aa30.36■■■□□ 2.45
PPFIA3-205ENST00000602509 SRBD1Q8N5C6 995 aaKnown RBP30.36■■■□□ 2.45
PPFIA3-205ENST00000602509 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.36■■■□□ 2.45
PPFIA3-205ENST00000602509 NOC4LQ9BVI4 516 aaKnown RBP30.36■■■□□ 2.45
PPFIA3-205ENST00000602509 TRMT13Q9NUP7 481 aaKnown RBP30.36■■■□□ 2.45
PPFIA3-205ENST00000602509 MMP3P08254 477 aa30.35■■■□□ 2.45
PPFIA3-205ENST00000602509 LAMC2Q13753 1193 aa30.35■■■□□ 2.45
PPFIA3-205ENST00000602509 KRT32Q14532 448 aa30.35■■■□□ 2.45
PPFIA3-205ENST00000602509 ZNF697Q5TEC3 545 aa30.35■■■□□ 2.45
PPFIA3-205ENST00000602509 RAB11FIP4Q86YS3 637 aa30.35■■■□□ 2.45
PPFIA3-205ENST00000602509 DHX37Q8IY37 1157 aaKnown RBP30.35■■■□□ 2.45
PPFIA3-205ENST00000602509 CUL5Q93034 780 aa30.35■■■□□ 2.45
PPFIA3-205ENST00000602509 UMODL1Q5DID0 1318 aa30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 ACRP10323 421 aa30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 CASTP20810 708 aaKnown RBP30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 CCL23P55773 120 aa30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 DGKDQ16760 1214 aa30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 PSRC1Q6PGN9 363 aaPredicted RBP30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 SGMS1Q86VZ5 419 aa30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 CMTR1Q8N1G2 835 aaKnown RBP30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 FANCBQ8NB91 859 aa30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 IL31RAQ8NI17 732 aa30.34■■■□□ 2.45
PPFIA3-205ENST00000602509 PTPN11Q06124 597 aaPredicted RBP30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 TMEM240Q5SV17 173 aa30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 C16orf59Q7L2K0 433 aa30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 DHX32Q7L7V1 743 aaKnown RBP30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 MICU3Q86XE3 530 aa30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 SMARCC2Q8TAQ2 1214 aa30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 EMID1Q96A84 441 aaPredicted RBP30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 FAM161BQ96MY7 647 aa30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 IL23AQ9NPF7 189 aa30.33■■■□□ 2.45
PPFIA3-205ENST00000602509 RGS20O76081 388 aa30.32■■■□□ 2.44
PPFIA3-205ENST00000602509 CYP2C9P11712 490 aa30.32■■■□□ 2.44
PPFIA3-205ENST00000602509 TSGA10IPQ3SY00 556 aa30.32■■■□□ 2.44
PPFIA3-205ENST00000602509 RASEFQ8IZ41 740 aa30.32■■■□□ 2.44
PPFIA3-205ENST00000602509 CCDC82Q8N4S0 544 aa30.32■■■□□ 2.44
PPFIA3-205ENST00000602509 PPP1R13LQ8WUF5 828 aa30.32■■■□□ 2.44
PPFIA3-205ENST00000602509 NOD1Q9Y239 953 aa30.32■■■□□ 2.44
PPFIA3-205ENST00000602509 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.31■■■□□ 2.44
PPFIA3-205ENST00000602509 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.31■■■□□ 2.44
PPFIA3-205ENST00000602509 ZNF365Q70YC5 407 aa30.31■■■□□ 2.44
PPFIA3-205ENST00000602509 PPTC7Q8NI37 304 aa30.31■■■□□ 2.44
PPFIA3-205ENST00000602509 BAZ2BQ9UIF8 2168 aaKnown RBP30.31■■■□□ 2.44
PPFIA3-205ENST00000602509 COL6A3P12111 3177 aa30.31■■■□□ 2.44
PPFIA3-205ENST00000602509 HMGB1P09429 215 aaKnown RBP30.3■■■□□ 2.44
PPFIA3-205ENST00000602509 TGFB3P10600 412 aa30.3■■■□□ 2.44
PPFIA3-205ENST00000602509 EXOSC10Q01780 885 aaKnown RBP30.3■■■□□ 2.44
PPFIA3-205ENST00000602509 TMTC3Q6ZXV5 915 aa30.3■■■□□ 2.44
PPFIA3-205ENST00000602509 ZFP91Q96JP5 570 aaPredicted RBP30.3■■■□□ 2.44
PPFIA3-205ENST00000602509 WNT8AQ9H1J5 351 aa30.3■■■□□ 2.44
PPFIA3-205ENST00000602509 STXBP5LQ9Y2K9 1186 aa30.3■■■□□ 2.44
PPFIA3-205ENST00000602509 FGBP02675 491 aa30.29■■■□□ 2.44
PPFIA3-205ENST00000602509 ADCK5Q3MIX3 580 aa30.29■■■□□ 2.44
PPFIA3-205ENST00000602509 GNPTABQ3T906 1256 aa30.29■■■□□ 2.44
PPFIA3-205ENST00000602509 RPUSD2Q8IZ73 545 aaKnown RBP30.29■■■□□ 2.44
PPFIA3-205ENST00000602509 TCEANC2Q96MN5 208 aa30.29■■■□□ 2.44
PPFIA3-205ENST00000602509 MTIF3Q9H2K0 278 aaKnown RBP30.29■■■□□ 2.44
PPFIA3-205ENST00000602509 PIK3CDO00329 1044 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 SORBS3O60504 671 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 STAM2O75886 525 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 GGPS1O95749 300 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 CELF3Q5SZQ8 465 aaKnown RBP30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 APOA5Q6Q788 366 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 USP17L6PQ6QN14 398 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 SPATA33Q96N06 139 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 KATNAL1Q9BW62 490 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 PSTPIP2Q9H939 334 aa30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 RBM28Q9NW13 759 aaKnown RBP30.28■■■□□ 2.44
PPFIA3-205ENST00000602509 FRMPD4Q14CM0 1322 aa30.27■■■□□ 2.44
PPFIA3-205ENST00000602509 hCG_1642624A0A1W2PR95 340 aa30.27■■■□□ 2.44
PPFIA3-205ENST00000602509 FGD1P98174 961 aa30.27■■■□□ 2.44
PPFIA3-205ENST00000602509 MYSM1Q5VVJ2 828 aa30.27■■■□□ 2.44
PPFIA3-205ENST00000602509 RETREG2Q8NC44 543 aa30.27■■■□□ 2.44
PPFIA3-205ENST00000602509 KAT2BQ92831 832 aa30.27■■■□□ 2.44
PPFIA3-205ENST00000602509 MLXIPQ9HAP2 919 aa30.27■■■□□ 2.44
PPFIA3-205ENST00000602509 MEIS2O14770 477 aa30.26■■■□□ 2.43
PPFIA3-205ENST00000602509 ZBTB43O43298 467 aa30.26■■■□□ 2.43
PPFIA3-205ENST00000602509 UBA1P22314 1058 aaKnown RBP30.26■■■□□ 2.43
PPFIA3-205ENST00000602509 SCLYQ96I15 445 aa30.26■■■□□ 2.43
PPFIA3-205ENST00000602509 SEMA6BQ9H3T3 888 aa30.26■■■□□ 2.43
PPFIA3-205ENST00000602509 PPFIA4O75335 1185 aa30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 MRPS9P82933 396 aaKnown RBP30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 SP2Q02086 613 aa30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 BFSP2Q13515 415 aa30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 PTGISQ16647 500 aa30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 RTN1Q16799 776 aa30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 RASIP1Q5U651 963 aa30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 XRRA1Q6P2D8 792 aa30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 HEATR3Q7Z4Q2 680 aa30.25■■■□□ 2.43
PPFIA3-205ENST00000602509 SESTD1Q86VW0 696 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms