RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 DGKDQ16760 1214 aa20.77■□□□□ 0.92
SHKBP1-227ENST00000602011 AAK1Q2M2I8 961 aa20.77■□□□□ 0.92
SHKBP1-227ENST00000602011 ARHGEF16Q5VV41 709 aa20.77■□□□□ 0.92
SHKBP1-227ENST00000602011 ENAHQ8N8S7 591 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-227ENST00000602011 TAAR1Q96RJ0 339 aa20.77■□□□□ 0.92
SHKBP1-227ENST00000602011 KATNAL1Q9BW62 490 aa20.77■□□□□ 0.92
SHKBP1-227ENST00000602011 AMNQ9BXJ7 453 aa20.77■□□□□ 0.92
SHKBP1-227ENST00000602011 BDP1A6H8Y1 2624 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 XIRP2A4UGR9 3374 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 B4E1Z4 1266 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 DHX16O60231 1041 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 GHRHRQ02643 423 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 PTGISQ16647 500 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 QRICH1Q2TAL8 776 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 KRT40Q6A162 431 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 IL27Q8NEV9 243 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 AFG1LQ8WV93 481 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 COPS5Q92905 334 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 FTOQ9C0B1 505 aaKnown RBP eCLIP20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 SCN10AQ9Y5Y9 1956 aa20.76■□□□□ 0.91
SHKBP1-227ENST00000602011 EPOPA6NHQ4 379 aa20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 GTPBP6O43824 516 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 ARHGEF15O94989 841 aa20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 ARIH2O95376 493 aa20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 MMP3P08254 477 aa20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 TRDNQ13061 729 aa20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 IFIT1BQ5T764 474 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 JMJD4Q9H9V9 463 aa20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 DDX41Q9UJV9 622 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 PRRC2BQ5JSZ5 2229 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-227ENST00000602011 EFCAB14O75071 495 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 PPFIA4O75335 1185 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 CA3P07451 260 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 NR3C2P08235 984 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 TGFB3P10600 412 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 KCNQ1P51787 676 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 ARHGAP1Q07960 439 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 RBL2Q08999 1139 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 SKIV2LQ15477 1246 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 TBC1D5Q92609 795 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 VAT1LQ9HCJ6 419 aa20.74■□□□□ 0.91
SHKBP1-227ENST00000602011 IGHDP01880 384 aa20.73■□□□□ 0.91
SHKBP1-227ENST00000602011 HSD17B4P51659 736 aa20.73■□□□□ 0.91
SHKBP1-227ENST00000602011 LY6KQ17RY6 165 aa20.73■□□□□ 0.91
SHKBP1-227ENST00000602011 PPTC7Q8NI37 304 aa20.73■□□□□ 0.91
SHKBP1-227ENST00000602011 CPVLQ9H3G5 476 aa20.73■□□□□ 0.91
SHKBP1-227ENST00000602011 PXMP2Q9NR77 195 aa20.73■□□□□ 0.91
SHKBP1-227ENST00000602011 MRVI1Q9Y6F6 885 aa20.73■□□□□ 0.91
SHKBP1-227ENST00000602011 KLRF2D3W0D1 207 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 ZBTB5O15062 677 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 CFBP00751 764 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 BMP1P13497 986 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 SELPP16109 830 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 KCNJ6P48051 423 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 STOX1Q6ZVD7 989 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 SPRED2Q7Z698 418 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 HERC6Q8IVU3 1022 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 DHX37Q8IY37 1157 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 C7orf31Q8N865 590 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 RUFY2Q8WXA3 655 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 MTMR8Q96EF0 704 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 COL20A1Q9P218 1284 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 GTF2IRD1Q9UHL9 959 aa20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 U3KPZ7 1027 aaPredicted RBP20.72■□□□□ 0.91
SHKBP1-227ENST00000602011 CHMP4BP1P59074 171 aa20.71■□□□□ 0.91
SHKBP1-227ENST00000602011 KAT2BQ92831 832 aa20.71■□□□□ 0.91
SHKBP1-227ENST00000602011 PCDHA1Q9Y5I3 950 aa20.71■□□□□ 0.91
SHKBP1-227ENST00000602011 MTCH2Q9Y6C9 303 aa20.71■□□□□ 0.91
SHKBP1-227ENST00000602011 TRANK1O15050 2925 aa20.71■□□□□ 0.91
SHKBP1-227ENST00000602011 ABHD14A-ACY1A0A1B0GW23 586 aa20.7■□□□□ 0.9
SHKBP1-227ENST00000602011 PALM3A6NDB9 673 aaPredicted RBP20.7■□□□□ 0.9
SHKBP1-227ENST00000602011 PTK7Q13308 1070 aa20.7■□□□□ 0.9
SHKBP1-227ENST00000602011 CHST3Q7LGC8 479 aa20.7■□□□□ 0.9
SHKBP1-227ENST00000602011 VSIG10LQ86VR7 867 aa20.7■□□□□ 0.9
SHKBP1-227ENST00000602011 COG5Q9UP83 839 aa20.7■□□□□ 0.9
SHKBP1-227ENST00000602011 TET1Q8NFU7 2136 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 ERICH2A1L162 156 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 F2P00734 622 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 CXCL10P02778 98 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 HOXD8P13378 290 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 EIF2AK2P19525 551 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 PSEN2P49810 448 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 SART3Q15020 963 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 SEC23AQ15436 765 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 GDF6Q6KF10 455 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 CNKSR3Q6P9H4 555 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 LRRC8DQ7L1W4 858 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 ARNTL2Q8WYA1 636 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 PDCD2LQ9BRP1 358 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 LMCD1Q9NZU5 365 aa20.69■□□□□ 0.9
SHKBP1-227ENST00000602011 HAS3O00219 553 aa20.68■□□□□ 0.9
SHKBP1-227ENST00000602011 TLL1O43897 1013 aa20.68■□□□□ 0.9
SHKBP1-227ENST00000602011 STAM2O75886 525 aa20.68■□□□□ 0.9
SHKBP1-227ENST00000602011 TAP1Q03518 808 aa20.68■□□□□ 0.9
SHKBP1-227ENST00000602011 TMCO2Q7Z6W1 182 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-227ENST00000602011 RIOX1Q9H6W3 641 aa20.68■□□□□ 0.9
SHKBP1-227ENST00000602011 MAD2L2Q9UI95 211 aa20.68■□□□□ 0.9
SHKBP1-227ENST00000602011 GCOM1H8Y6P7 765 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 POLR2MP0CAP2 368 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms