RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 MMP3P08254 477 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 CCND2P30279 289 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 CHMP4BP1P59074 171 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 LY6KQ17RY6 165 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 GNPTABQ3T906 1256 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 STOX1Q6ZVD7 989 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 CHST3Q7LGC8 479 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 OTOP2Q7RTS6 562 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 TMTC2Q8N394 836 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
FARP1-232ENST00000601009 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 AFG1LQ8WV93 481 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 TBC1D5Q92609 795 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 COPS5Q92905 334 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 MAP4K1Q92918 833 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 MAP3K14Q99558 947 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 LZTS2Q9BRK4 669 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 PBX4Q9BYU1 374 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 WNT8AQ9H1J5 351 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 RIOX1Q9H6W3 641 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 COL20A1Q9P218 1284 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 MYO9BQ13459 2157 aa10.64□□□□□ -0.71
FARP1-232ENST00000601009 UMODL1Q5DID0 1318 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 STAM2O75886 525 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 DDAH1O94760 285 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 PARNO95453 639 aaKnown RBP10.63□□□□□ -0.71
FARP1-232ENST00000601009 TGFB3P10600 412 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 CYP2C9P11712 490 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 MYCLP12524 364 aaPredicted RBP10.63□□□□□ -0.71
FARP1-232ENST00000601009 MCM5P33992 734 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 GNAQP50148 359 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 ARHGAP1Q07960 439 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 TROAPQ12815 778 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 PTGISQ16647 500 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 SESTD1Q86VW0 696 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 DHX37Q8IY37 1157 aaKnown RBP10.63□□□□□ -0.71
FARP1-232ENST00000601009 PPTC7Q8NI37 304 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 AFAP1L1Q8TED9 768 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 CUL5Q93034 780 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 PIGSQ96S52 555 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 PDCD2LQ9BRP1 358 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 SLC28A3Q9HAS3 691 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 SEC63Q9UGP8 760 aaKnown RBP10.63□□□□□ -0.71
FARP1-232ENST00000601009 DDX41Q9UJV9 622 aaKnown RBP10.63□□□□□ -0.71
FARP1-232ENST00000601009 RBM8AQ9Y5S9 174 aaKnown RBP10.63□□□□□ -0.71
FARP1-232ENST00000601009 BAZ2BQ9UIF8 2168 aaKnown RBP10.63□□□□□ -0.71
FARP1-232ENST00000601009 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
FARP1-232ENST00000601009 TANC1Q9C0D5 1861 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 CALM1P0DP23 149 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 CALM2P0DP24 149 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 CALM3P0DP25 149 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 SMARCA1P28370 1054 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 GRIN2CQ14957 1233 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 RNF20Q5VTR2 975 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 NFXL1Q6ZNB6 911 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 VSIG10LQ86VR7 867 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 MB21D2Q8IYB1 491 aaPredicted RBP10.62□□□□□ -0.71
FARP1-232ENST00000601009 C7orf31Q8N865 590 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 RRP36Q96EU6 259 aaKnown RBP10.62□□□□□ -0.71
FARP1-232ENST00000601009 SCLYQ96I15 445 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 TMEM87BQ96K49 555 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 SLC9A7Q96T83 725 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 FTOQ9C0B1 505 aaKnown RBP eCLIP10.62□□□□□ -0.71
FARP1-232ENST00000601009 VCANP13611 3396 aa10.62□□□□□ -0.71
FARP1-232ENST00000601009 MYH7BA7E2Y1 1941 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 GRXCR1A8MXD5 290 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 OPLAHO14841 1288 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 PPP1R11O60927 126 aaPredicted RBP10.61□□□□□ -0.71
FARP1-232ENST00000601009 PPFIA4O75335 1185 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 BAIAP3O94812 1187 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 IQCF3P0C7M6 154 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 ATP2A2P16615 1042 aaKnown RBP10.61□□□□□ -0.71
FARP1-232ENST00000601009 HOXA13P31271 388 aaPredicted RBP10.61□□□□□ -0.71
FARP1-232ENST00000601009 PBX2P40425 430 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 PGM5Q15124 567 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 DEFB128Q7Z7B8 93 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 ZNF654Q8IZM8 581 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 PHOSPHO2Q8TCD6 241 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 SPZ1Q9BXG8 430 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 MLXIPQ9HAP2 919 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 CXXC1Q9P0U4 656 aaPredicted RBP10.61□□□□□ -0.71
FARP1-232ENST00000601009 PCDHA11Q9Y5I1 949 aa10.61□□□□□ -0.71
FARP1-232ENST00000601009 KIF28PB7ZC32 967 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 NOP56O00567 594 aaKnown RBP10.6□□□□□ -0.71
FARP1-232ENST00000601009 PRC1O43663 620 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 GGPS1O95749 300 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 F2P00734 622 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 LIFRP42702 1097 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 KCNJ6P48051 423 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 PSEN2P49810 448 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 NEDD9Q14511 834 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 MFSD10Q14728 455 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 CELF3Q5SZQ8 465 aaKnown RBP10.6□□□□□ -0.71
FARP1-232ENST00000601009 MYSM1Q5VVJ2 828 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 PPP2R2DQ66LE6 453 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 XRRA1Q6P2D8 792 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 SYNE3Q6ZMZ3 975 aa10.6□□□□□ -0.71
FARP1-232ENST00000601009 CENPQQ7L2Z9 268 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms