RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 VPS54Q9P1Q0 977 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 PCDHA6Q9UN73 950 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 PCDHA8Q9Y5H6 950 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 KIAA0100Q14667 2235 aaKnown RBP14.88□□□□□ -0.03
SRRM1-223ENST00000600523 TGFB3P10600 412 aa14.88□□□□□ -0.03
SRRM1-223ENST00000600523 ZNF76P36508 570 aa14.88□□□□□ -0.03
SRRM1-223ENST00000600523 HMGN5P82970 282 aaKnown RBP14.88□□□□□ -0.03
SRRM1-223ENST00000600523 DUSP28Q4G0W2 176 aa14.88□□□□□ -0.03
SRRM1-223ENST00000600523 TAPT1Q6NXT6 567 aa14.88□□□□□ -0.03
SRRM1-223ENST00000600523 TLK2Q86UE8 772 aa14.88□□□□□ -0.03
SRRM1-223ENST00000600523 SHISA4Q96DD7 197 aa14.88□□□□□ -0.03
SRRM1-223ENST00000600523 C11orf49Q9H6J7 331 aa14.88□□□□□ -0.03
SRRM1-223ENST00000600523 HTTP42858 3142 aa14.88□□□□□ -0.03
SRRM1-223ENST00000600523 RBM47A0AV96 593 aaKnown RBP14.87□□□□□ -0.03
SRRM1-223ENST00000600523 DYNC1LI2O43237 492 aaPredicted RBP14.87□□□□□ -0.03
SRRM1-223ENST00000600523 PGK1P00558 417 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 CPT1AP50416 773 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 GJA9P57773 515 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 GNASQ5JWF2 1037 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 GJC2Q5T442 439 aaPredicted RBP14.87□□□□□ -0.03
SRRM1-223ENST00000600523 TYW1BQ6NUM6 668 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 CCDC83Q8IWF9 413 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 FAM184AQ8NB25 1140 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 OR6J1Q8NGC5 347 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 PAWRQ96IZ0 340 aaKnown RBP14.87□□□□□ -0.03
SRRM1-223ENST00000600523 TSEN34Q9BSV6 310 aaKnown RBP14.87□□□□□ -0.03
SRRM1-223ENST00000600523 ALG1Q9BT22 464 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 PDGFCQ9NRA1 345 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 FRMPD4Q14CM0 1322 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 SYNRGQ9UMZ2 1314 aa14.87□□□□□ -0.03
SRRM1-223ENST00000600523 MOXD2PA6NHM9 499 aa14.86□□□□□ -0.03
SRRM1-223ENST00000600523 LARGE1O95461 756 aa14.86□□□□□ -0.03
SRRM1-223ENST00000600523 GH1P01241 217 aa14.86□□□□□ -0.03
SRRM1-223ENST00000600523 SMPD1P17405 629 aa14.86□□□□□ -0.03
SRRM1-223ENST00000600523 LRRC41Q15345 812 aa14.86□□□□□ -0.03
SRRM1-223ENST00000600523 FSCN1Q16658 493 aaKnown RBP14.86□□□□□ -0.03
SRRM1-223ENST00000600523 JAKMIP3Q5VZ66 844 aa14.86□□□□□ -0.03
SRRM1-223ENST00000600523 GIMAP8Q8ND71 665 aaPredicted RBP14.86□□□□□ -0.03
SRRM1-223ENST00000600523 NSUN7Q8NE18 718 aaKnown RBP14.86□□□□□ -0.03
SRRM1-223ENST00000600523 ANO3Q9BYT9 981 aa14.86□□□□□ -0.03
SRRM1-223ENST00000600523 PCDHA4Q9UN74 947 aa14.86□□□□□ -0.03
SRRM1-223ENST00000600523 DDX49Q9Y6V7 483 aaKnown RBP14.86□□□□□ -0.03
SRRM1-223ENST00000600523 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.85□□□□□ -0.03
SRRM1-223ENST00000600523 MAFGO15525 162 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 FIBPO43427 364 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 KPNA6O60684 536 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 CST5P28325 142 aaPredicted RBP14.85□□□□□ -0.03
SRRM1-223ENST00000600523 LAMC2Q13753 1193 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 NEDD9Q14511 834 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 SAFBQ15424 915 aaKnown RBP eCLIP14.85□□□□□ -0.03
SRRM1-223ENST00000600523 VTI1AQ96AJ9 217 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 LENG1Q96BZ8 264 aaPredicted RBP14.85□□□□□ -0.03
SRRM1-223ENST00000600523 GLT1D1Q96MS3 346 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 SENP6Q9GZR1 1112 aaPredicted RBP14.85□□□□□ -0.03
SRRM1-223ENST00000600523 UPF3AQ9H1J1 476 aaKnown RBP14.85□□□□□ -0.03
SRRM1-223ENST00000600523 RTEL1Q9NZ71 1219 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 GNEQ9Y223 722 aaKnown RBP14.85□□□□□ -0.03
SRRM1-223ENST00000600523 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.85□□□□□ -0.03
SRRM1-223ENST00000600523 MCM3APO60318 1980 aa14.85□□□□□ -0.03
SRRM1-223ENST00000600523 LCTP09848 1927 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 ADAMTS4O75173 837 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 CABYRO75952 493 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 CTDNEP1O95476 244 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 SREBF1P36956 1147 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 CLK2P49760 499 aaKnown RBP14.84□□□□□ -0.03
SRRM1-223ENST00000600523 MTMR1Q13613 665 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 DHX37Q8IY37 1157 aaKnown RBP14.84□□□□□ -0.03
SRRM1-223ENST00000600523 BLIDQ8IZY5 108 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 IL31RAQ8NI17 732 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 DPF3Q92784 378 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 GPRASP2Q96D09 838 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 INPP4AQ96PE3 977 aaPredicted RBP14.84□□□□□ -0.03
SRRM1-223ENST00000600523 MLXIPQ9HAP2 919 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 POLR3EQ9NVU0 708 aa14.84□□□□□ -0.03
SRRM1-223ENST00000600523 DDX41Q9UJV9 622 aaKnown RBP14.84□□□□□ -0.03
SRRM1-223ENST00000600523 CCDC194A0A1B0GVG4 234 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 NOP56O00567 594 aaKnown RBP14.83□□□□□ -0.04
SRRM1-223ENST00000600523 ACLYP53396 1101 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 MRPS9P82933 396 aaKnown RBP14.83□□□□□ -0.04
SRRM1-223ENST00000600523 ARHGAP4P98171 946 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 KCNA10Q16322 511 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 LY6KQ17RY6 165 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 CCDC62Q6P9F0 684 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 KRT25Q7Z3Z0 450 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 DAGLBQ8NCG7 672 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 KLHDC9Q8NEP7 349 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 TMX3Q96JJ7 454 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 STARD7Q9NQZ5 370 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 TMEM260Q9NX78 707 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 TCEAL9Q9UHQ7 104 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 PHF24Q9UPV7 400 aa14.83□□□□□ -0.04
SRRM1-223ENST00000600523 SPATA31C2B4DYI2 1134 aa14.82□□□□□ -0.04
SRRM1-223ENST00000600523 ADCY6O43306 1168 aa14.82□□□□□ -0.04
SRRM1-223ENST00000600523 JAK2O60674 1132 aa14.82□□□□□ -0.04
SRRM1-223ENST00000600523 ICAM3P32942 547 aa14.82□□□□□ -0.04
SRRM1-223ENST00000600523 KRT2P35908 639 aa14.82□□□□□ -0.04
SRRM1-223ENST00000600523 NKX3-2P78367 333 aa14.82□□□□□ -0.04
SRRM1-223ENST00000600523 GNL2Q13823 731 aaKnown RBP14.82□□□□□ -0.04
SRRM1-223ENST00000600523 CEP55Q53EZ4 464 aa14.82□□□□□ -0.04
SRRM1-223ENST00000600523 UBE2Q1Q7Z7E8 422 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms