RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 PFKMP08237 780 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 ATP2A2P16615 1042 aaKnown RBP21.97■■□□□ 1.11
SNRPA-204ENST00000598452 IGFBP4P22692 258 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 HOXA13P31271 388 aaPredicted RBP21.97■■□□□ 1.11
SNRPA-204ENST00000598452 HSD17B4P51659 736 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 TRDNQ13061 729 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 PTGISQ16647 500 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 HOMER1Q86YM7 354 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 RETREG2Q8NC44 543 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 RUFY2Q8WXA3 655 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 PCDHA1Q9Y5I3 950 aa21.97■■□□□ 1.11
SNRPA-204ENST00000598452 PITPNM1O00562 1244 aa21.96■■□□□ 1.11
SNRPA-204ENST00000598452 EIF3JO75822 258 aaKnown RBP21.96■■□□□ 1.11
SNRPA-204ENST00000598452 CCDC85BQ15834 202 aaPredicted RBP21.96■■□□□ 1.11
SNRPA-204ENST00000598452 GDF6Q6KF10 455 aaPredicted RBP21.96■■□□□ 1.11
SNRPA-204ENST00000598452 CTAGE1Q96RT6 745 aa21.96■■□□□ 1.11
SNRPA-204ENST00000598452 PCDHA11Q9Y5I1 949 aa21.96■■□□□ 1.11
SNRPA-204ENST00000598452 MRVI1Q9Y6F6 885 aa21.96■■□□□ 1.11
SNRPA-204ENST00000598452 U3KPZ7 1027 aaPredicted RBP21.96■■□□□ 1.11
SNRPA-204ENST00000598452 RBAK-RBAKDNI3L0D1 243 aa21.95■■□□□ 1.1
SNRPA-204ENST00000598452 IFIT3O14879 490 aaKnown RBP21.95■■□□□ 1.1
SNRPA-204ENST00000598452 SORBS3O60504 671 aa21.95■■□□□ 1.1
SNRPA-204ENST00000598452 MYCLP12524 364 aaPredicted RBP21.95■■□□□ 1.1
SNRPA-204ENST00000598452 CASTP20810 708 aaKnown RBP21.95■■□□□ 1.1
SNRPA-204ENST00000598452 BFSP2Q13515 415 aa21.95■■□□□ 1.1
SNRPA-204ENST00000598452 GRM4Q14833 912 aa21.95■■□□□ 1.1
SNRPA-204ENST00000598452 PPP2R2DQ66LE6 453 aa21.95■■□□□ 1.1
SNRPA-204ENST00000598452 ZFP91Q96JP5 570 aaPredicted RBP21.95■■□□□ 1.1
SNRPA-204ENST00000598452 PIGSQ96S52 555 aa21.95■■□□□ 1.1
SNRPA-204ENST00000598452 FTOQ9C0B1 505 aaKnown RBP eCLIP21.95■■□□□ 1.1
SNRPA-204ENST00000598452 MYH7BA7E2Y1 1941 aa21.95■■□□□ 1.1
SNRPA-204ENST00000598452 BAZ2BQ9UIF8 2168 aaKnown RBP21.94■■□□□ 1.1
SNRPA-204ENST00000598452 RGS20O76081 388 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 ACTN1P12814 892 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 RFC2P35250 354 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 GHRHRQ02643 423 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 DGKDQ16760 1214 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 STOX1Q6ZVD7 989 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 IL31RAQ8NI17 732 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 PDCD2LQ9BRP1 358 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 SCN5AQ14524 2016 aa21.94■■□□□ 1.1
SNRPA-204ENST00000598452 E7EWF7 191 aa21.93■■□□□ 1.1
SNRPA-204ENST00000598452 CYTH3O43739 400 aa21.93■■□□□ 1.1
SNRPA-204ENST00000598452 RALYLQ86SE5 291 aaKnown RBP21.93■■□□□ 1.1
SNRPA-204ENST00000598452 SESTD1Q86VW0 696 aa21.93■■□□□ 1.1
SNRPA-204ENST00000598452 GBF1Q92538 1859 aa21.93■■□□□ 1.1
SNRPA-204ENST00000598452 ALG1Q9BT22 464 aa21.93■■□□□ 1.1
SNRPA-204ENST00000598452 RIOX1Q9H6W3 641 aa21.93■■□□□ 1.1
SNRPA-204ENST00000598452 HDAC6Q9UBN7 1215 aa21.93■■□□□ 1.1
SNRPA-204ENST00000598452 TRIP12Q14669 1992 aaPredicted RBP21.92■■□□□ 1.1
SNRPA-204ENST00000598452 CA3P07451 260 aa21.92■■□□□ 1.1
SNRPA-204ENST00000598452 ZNF286BP0CG31 522 aa21.92■■□□□ 1.1
SNRPA-204ENST00000598452 PSEN2P49810 448 aa21.92■■□□□ 1.1
SNRPA-204ENST00000598452 TRAF1Q13077 416 aa21.92■■□□□ 1.1
SNRPA-204ENST00000598452 LAMC2Q13753 1193 aa21.92■■□□□ 1.1
SNRPA-204ENST00000598452 GPNMBQ14956 572 aa21.92■■□□□ 1.1
SNRPA-204ENST00000598452 WTAPQ15007 396 aa21.92■■□□□ 1.1
SNRPA-204ENST00000598452 TMEM67Q5HYA8 995 aa21.92■■□□□ 1.1
SNRPA-204ENST00000598452 DHX37Q8IY37 1157 aaKnown RBP21.92■■□□□ 1.1
SNRPA-204ENST00000598452 DHX38Q92620 1227 aaKnown RBP21.92■■□□□ 1.1
SNRPA-204ENST00000598452 EMID1Q96A84 441 aaPredicted RBP21.92■■□□□ 1.1
SNRPA-204ENST00000598452 ERICH2A1L162 156 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 SGSM2O43147 1006 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 ANTXR2P58335 489 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 TROAPQ12815 778 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 PGM5Q15124 567 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 TJAP1Q5JTD0 557 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 VSIG10LQ86VR7 867 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 FCHSD1Q86WN1 690 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 NCOA7Q8NI08 942 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 PPTC7Q8NI37 304 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 PIBF1Q8WXW3 757 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 CERS4Q9HA82 394 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 MAP3K20Q9NYL2 800 aaKnown RBP21.91■■□□□ 1.1
SNRPA-204ENST00000598452 GTF2IRD1Q9UHL9 959 aa21.91■■□□□ 1.1
SNRPA-204ENST00000598452 GCOM1H8Y6P7 765 aaPredicted RBP21.9■■□□□ 1.1
SNRPA-204ENST00000598452 RFXAPO00287 272 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 POLR2MP0CAP2 368 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 SP2Q02086 613 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 MFSD10Q14728 455 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 KIAA0753Q2KHM9 967 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 MYSM1Q5VVJ2 828 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 SAMD3Q8N6K7 520 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 C7orf31Q8N865 590 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 CAGE1Q8TC20 777 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 AFAP1L1Q8TED9 768 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 SYMPKQ92797 1274 aaKnown RBP21.9■■□□□ 1.1
SNRPA-204ENST00000598452 GPKOWQ92917 476 aaPredicted RBP eCLIP21.9■■□□□ 1.1
SNRPA-204ENST00000598452 SLC9A7Q96T83 725 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 CHD7Q9P2D1 2997 aa21.9■■□□□ 1.1
SNRPA-204ENST00000598452 SPTBN5Q9NRC6 3674 aaKnown RBP21.9■■□□□ 1.1
SNRPA-204ENST00000598452 HAS3O00219 553 aa21.89■■□□□ 1.09
SNRPA-204ENST00000598452 ARHGEF15O94989 841 aa21.89■■□□□ 1.09
SNRPA-204ENST00000598452 GGPS1O95749 300 aa21.89■■□□□ 1.09
SNRPA-204ENST00000598452 F2P00734 622 aa21.89■■□□□ 1.09
SNRPA-204ENST00000598452 SELPP16109 830 aa21.89■■□□□ 1.09
SNRPA-204ENST00000598452 ZNF200P98182 395 aaPredicted RBP21.89■■□□□ 1.09
SNRPA-204ENST00000598452 HSDL1Q3SXM5 330 aa21.89■■□□□ 1.09
SNRPA-204ENST00000598452 CELF3Q5SZQ8 465 aaKnown RBP21.89■■□□□ 1.09
SNRPA-204ENST00000598452 HERC6Q8IVU3 1022 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms