RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 PTPN11Q06124 597 aaPredicted RBP26.62■■□□□ 1.85
SSBP4-205ENST00000598159 PGM5Q15124 567 aa26.62■■□□□ 1.85
SSBP4-205ENST00000598159 AFG1LQ8WV93 481 aa26.62■■□□□ 1.85
SSBP4-205ENST00000598159 NOC4LQ9BVI4 516 aaKnown RBP26.62■■□□□ 1.85
SSBP4-205ENST00000598159 STXBP5LQ9Y2K9 1186 aa26.62■■□□□ 1.85
SSBP4-205ENST00000598159 MRVI1Q9Y6F6 885 aa26.62■■□□□ 1.85
SSBP4-205ENST00000598159 SCN10AQ9Y5Y9 1956 aa26.62■■□□□ 1.85
SSBP4-205ENST00000598159 CASTP20810 708 aaKnown RBP26.61■■□□□ 1.85
SSBP4-205ENST00000598159 ARHGAP1Q07960 439 aa26.61■■□□□ 1.85
SSBP4-205ENST00000598159 LAMC2Q13753 1193 aa26.61■■□□□ 1.85
SSBP4-205ENST00000598159 FCHSD1Q86WN1 690 aa26.61■■□□□ 1.85
SSBP4-205ENST00000598159 PIBF1Q8WXW3 757 aa26.61■■□□□ 1.85
SSBP4-205ENST00000598159 EMID1Q96A84 441 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-205ENST00000598159 IL23AQ9NPF7 189 aa26.61■■□□□ 1.85
SSBP4-205ENST00000598159 SLC12A7Q9Y666 1083 aa26.61■■□□□ 1.85
SSBP4-205ENST00000598159 TGFB3P10600 412 aa26.6■■□□□ 1.85
SSBP4-205ENST00000598159 TSGA10IPQ3SY00 556 aa26.6■■□□□ 1.85
SSBP4-205ENST00000598159 PSRC1Q6PGN9 363 aaPredicted RBP26.6■■□□□ 1.85
SSBP4-205ENST00000598159 ZNF365Q70YC5 407 aa26.6■■□□□ 1.85
SSBP4-205ENST00000598159 NEK1Q96PY6 1258 aa26.6■■□□□ 1.85
SSBP4-205ENST00000598159 SEC63Q9UGP8 760 aaKnown RBP26.6■■□□□ 1.85
SSBP4-205ENST00000598159 MMP3P08254 477 aa26.59■■□□□ 1.85
SSBP4-205ENST00000598159 ACRP10323 421 aa26.59■■□□□ 1.85
SSBP4-205ENST00000598159 CCND2P30279 289 aa26.59■■□□□ 1.85
SSBP4-205ENST00000598159 COL9A3Q14050 684 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-205ENST00000598159 DGKDQ16760 1214 aa26.59■■□□□ 1.85
SSBP4-205ENST00000598159 FAM47CQ5HY64 1035 aa26.59■■□□□ 1.85
SSBP4-205ENST00000598159 DHX37Q8IY37 1157 aaKnown RBP26.59■■□□□ 1.85
SSBP4-205ENST00000598159 RPUSD2Q8IZ73 545 aaKnown RBP26.59■■□□□ 1.85
SSBP4-205ENST00000598159 TRMT13Q9NUP7 481 aaKnown RBP26.59■■□□□ 1.85
SSBP4-205ENST00000598159 MYH7BA7E2Y1 1941 aa26.59■■□□□ 1.85
SSBP4-205ENST00000598159 RGS20O76081 388 aa26.58■■□□□ 1.85
SSBP4-205ENST00000598159 CCL23P55773 120 aa26.58■■□□□ 1.85
SSBP4-205ENST00000598159 SYNE3Q6ZMZ3 975 aa26.58■■□□□ 1.85
SSBP4-205ENST00000598159 SGMS1Q86VZ5 419 aa26.58■■□□□ 1.85
SSBP4-205ENST00000598159 SRBD1Q8N5C6 995 aaKnown RBP26.58■■□□□ 1.85
SSBP4-205ENST00000598159 FANCBQ8NB91 859 aa26.58■■□□□ 1.85
SSBP4-205ENST00000598159 SEMA6BQ9H3T3 888 aa26.58■■□□□ 1.85
SSBP4-205ENST00000598159 UMODL1Q5DID0 1318 aa26.58■■□□□ 1.85
SSBP4-205ENST00000598159 FGBP02675 491 aa26.57■■□□□ 1.84
SSBP4-205ENST00000598159 RASIP1Q5U651 963 aa26.57■■□□□ 1.84
SSBP4-205ENST00000598159 LRRC2Q9BYS8 371 aa26.57■■□□□ 1.84
SSBP4-205ENST00000598159 STAM2O75886 525 aa26.56■■□□□ 1.84
SSBP4-205ENST00000598159 CYP2C9P11712 490 aa26.56■■□□□ 1.84
SSBP4-205ENST00000598159 EXOSC10Q01780 885 aaKnown RBP26.56■■□□□ 1.84
SSBP4-205ENST00000598159 KRT32Q14532 448 aa26.56■■□□□ 1.84
SSBP4-205ENST00000598159 DHX32Q7L7V1 743 aaKnown RBP26.56■■□□□ 1.84
SSBP4-205ENST00000598159 PPTC7Q8NI37 304 aa26.56■■□□□ 1.84
SSBP4-205ENST00000598159 HERVK_113Q902F9 699 aa26.56■■□□□ 1.84
SSBP4-205ENST00000598159 CUL5Q93034 780 aa26.56■■□□□ 1.84
SSBP4-205ENST00000598159 FAM161BQ96MY7 647 aa26.56■■□□□ 1.84
SSBP4-205ENST00000598159 MTIF3Q9H2K0 278 aaKnown RBP26.56■■□□□ 1.84
SSBP4-205ENST00000598159 LAMA2P24043 3122 aaKnown RBP26.56■■□□□ 1.84
SSBP4-205ENST00000598159 TMEM265A0A087WTH1 108 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 PIK3CDO00329 1044 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 PLEKHA8P1O95397 391 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 RXRAP19793 462 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 CELF3Q5SZQ8 465 aaKnown RBP26.55■■□□□ 1.84
SSBP4-205ENST00000598159 MYSM1Q5VVJ2 828 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 SESTD1Q86VW0 696 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 IL31RAQ8NI17 732 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 SMARCC2Q8TAQ2 1214 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 GUCD1Q96NT3 240 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 WNT8AQ9H1J5 351 aa26.55■■□□□ 1.84
SSBP4-205ENST00000598159 PPFIA4O75335 1185 aa26.54■■□□□ 1.84
SSBP4-205ENST00000598159 CHMP4BP1P59074 171 aa26.54■■□□□ 1.84
SSBP4-205ENST00000598159 CMTR1Q8N1G2 835 aaKnown RBP26.54■■□□□ 1.84
SSBP4-205ENST00000598159 KAT2BQ92831 832 aa26.54■■□□□ 1.84
SSBP4-205ENST00000598159 KATNAL1Q9BW62 490 aa26.54■■□□□ 1.84
SSBP4-205ENST00000598159 HMGB1P09429 215 aaKnown RBP26.53■■□□□ 1.84
SSBP4-205ENST00000598159 GNPTABQ3T906 1256 aa26.53■■□□□ 1.84
SSBP4-205ENST00000598159 RASEFQ8IZ41 740 aa26.53■■□□□ 1.84
SSBP4-205ENST00000598159 RETREG2Q8NC44 543 aa26.53■■□□□ 1.84
SSBP4-205ENST00000598159 NOD1Q9Y239 953 aa26.53■■□□□ 1.84
SSBP4-205ENST00000598159 FRMPD4Q14CM0 1322 aa26.53■■□□□ 1.84
SSBP4-205ENST00000598159 MEIS2O14770 477 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 PFKMP08237 780 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 BFSP2Q13515 415 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 XRRA1Q6P2D8 792 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 USP17L6PQ6QN14 398 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 TMTC3Q6ZXV5 915 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 PPP1R13LQ8WUF5 828 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 SCLYQ96I15 445 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 PSTPIP2Q9H939 334 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 MLXIPQ9HAP2 919 aa26.52■■□□□ 1.84
SSBP4-205ENST00000598159 RBM28Q9NW13 759 aaKnown RBP26.52■■□□□ 1.84
SSBP4-205ENST00000598159 PITPNM1O00562 1244 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 GGPS1O95749 300 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 HOXD8P13378 290 aaPredicted RBP26.51■■□□□ 1.83
SSBP4-205ENST00000598159 ICAM3P32942 547 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 MRPS9P82933 396 aaKnown RBP26.51■■□□□ 1.83
SSBP4-205ENST00000598159 SP2Q02086 613 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 PTGISQ16647 500 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 ADCK5Q3MIX3 580 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 APOA5Q6Q788 366 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 MICU3Q86XE3 530 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 RAB11FIP4Q86YS3 637 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 CCDC82Q8N4S0 544 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 SLC17A8Q8NDX2 589 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 ZFP91Q96JP5 570 aaPredicted RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms