RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 ACVR2BQ13705 512 aa17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 LETM2Q2VYF4 491 aa17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 PRAMEF19Q5SWL8 479 aa17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 NEK8Q86SG6 692 aa17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 NLRX1Q86UT6 975 aa17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 NAP1L4Q99733 375 aaKnown RBP17.03■□□□□ 0.32
ARHGEF1-214ENST00000596957 MGAMO43451 1857 aa17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 FAM205CA6NFA0 338 aa17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 KIF28PB7ZC32 967 aa17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 SNAI1O95863 264 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 MYCP01106 439 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 CACNB2Q08289 660 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 MORC4Q8TE76 937 aa17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 TNFRSF25Q93038 417 aa17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 MCOLN1Q9GZU1 580 aa17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 NRBP1Q9UHY1 535 aa17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 MTMR6Q9Y217 621 aa17.02■□□□□ 0.32
ARHGEF1-214ENST00000596957 CCNT1O60563 726 aaKnown RBP17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 U2AF2P26368 475 aaKnown RBP eCLIP17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 USP11P51784 963 aa17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 MRPS9P82933 396 aaKnown RBP17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 EARS2Q5JPH6 523 aaKnown RBP17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 BRAPQ7Z569 592 aa17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 HMX1Q9NP08 348 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 MRVI1Q9Y6F6 885 aa17.01■□□□□ 0.31
ARHGEF1-214ENST00000596957 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 MARCH6O60337 910 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 CYP3A4P08684 503 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 ZSCAN22P10073 491 aaPredicted RBP17■□□□□ 0.31
ARHGEF1-214ENST00000596957 MTMR1Q13613 665 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 CEP55Q53EZ4 464 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 PRR16Q569H4 304 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 SCFD2Q8WU76 684 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 CDHR1Q96JP9 859 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 MXRA8Q9BRK3 442 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
ARHGEF1-214ENST00000596957 SMCHD1A6NHR9 2005 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 FIBPO43427 364 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 TXNP10599 105 aaKnown RBP16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 CYBAP13498 195 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 GCFC2P16383 781 aaKnown RBP16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 ADCYAP1R1P41586 468 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 TTLL4Q14679 1199 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 CCDC144BQ3MJ40 725 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 PLA2G4DQ86XP0 818 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 GPRASP2Q96D09 838 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 WDR11Q9BZH6 1224 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 JADE2Q9NQC1 790 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 PDGFCQ9NRA1 345 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 PKD2L1Q9P0L9 805 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 DDX25Q9UHL0 483 aaKnown RBP16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 UBIAD1Q9Y5Z9 338 aa16.99■□□□□ 0.31
ARHGEF1-214ENST00000596957 TDP2O95551 362 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 ZNF865P0CJ78 1059 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 AKR1A1P14550 325 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 ITGB5P18084 799 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 CCND3P30281 292 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 TNFAIP2Q03169 654 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 RESTQ13127 1097 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 RILPL1Q5EBL4 403 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 TTC38Q5R3I4 469 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 IQSEC1Q6DN90 963 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 KCNV1Q6PIU1 500 aa16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 INPP4AQ96PE3 977 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF1-214ENST00000596957 FAM86B1E9PN63 330 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 SEPT4O43236 478 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 IGHA2P01877 340 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 FAM86B2P0C5J1 330 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 CCL5P13501 91 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 CIITAP33076 1130 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 MCM7P33993 719 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 TRAPPC10P48553 1259 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 NUCB2P80303 420 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 PKP1Q13835 747 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 MAP3K21Q5TCX8 1036 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 TAPT1Q6NXT6 567 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 MOXD1Q6UVY6 613 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 NIPA1Q7RTP0 329 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 TRPV1Q8NER1 839 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 CYP2W1Q8TAV3 490 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 CRYGNQ8WXF5 182 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 KATNBL1Q9H079 304 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 RNF208Q9H0X6 261 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 UNC93B1Q9H1C4 597 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 TCEAL9Q9UHQ7 104 aa16.97■□□□□ 0.31
ARHGEF1-214ENST00000596957 SPATA31C2B4DYI2 1134 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 MEIS1O00470 390 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 SORBS3O60504 671 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 NEMFO60524 1076 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 RGS20O76081 388 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 F13A1P00488 732 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 RARBP10826 455 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 ZNF174Q15697 407 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms