RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 C16orf59Q7L2K0 433 aa29.37■■■□□ 2.29
ZNF558-203ENST00000595786 SKAP1Q86WV1 359 aa29.37■■■□□ 2.29
ZNF558-203ENST00000595786 CCDC136Q96JN2 1154 aa29.37■■■□□ 2.29
ZNF558-203ENST00000595786 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.37■■■□□ 2.29
ZNF558-203ENST00000595786 MRVI1Q9Y6F6 885 aa29.37■■■□□ 2.29
ZNF558-203ENST00000595786 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.36■■■□□ 2.29
ZNF558-203ENST00000595786 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.36■■■□□ 2.29
ZNF558-203ENST00000595786 TGFB3P10600 412 aa29.36■■■□□ 2.29
ZNF558-203ENST00000595786 LAMC2Q13753 1193 aa29.36■■■□□ 2.29
ZNF558-203ENST00000595786 PGM5Q15124 567 aa29.36■■■□□ 2.29
ZNF558-203ENST00000595786 ZNF697Q5TEC3 545 aa29.36■■■□□ 2.29
ZNF558-203ENST00000595786 SGMS1Q86VZ5 419 aa29.36■■■□□ 2.29
ZNF558-203ENST00000595786 AFG1LQ8WV93 481 aa29.36■■■□□ 2.29
ZNF558-203ENST00000595786 IL23AQ9NPF7 189 aa29.36■■■□□ 2.29
ZNF558-203ENST00000595786 SLC12A7Q9Y666 1083 aa29.36■■■□□ 2.29
ZNF558-203ENST00000595786 TMEM265A0A087WTH1 108 aa29.35■■■□□ 2.29
ZNF558-203ENST00000595786 MMP3P08254 477 aa29.35■■■□□ 2.29
ZNF558-203ENST00000595786 CASTP20810 708 aaKnown RBP29.35■■■□□ 2.29
ZNF558-203ENST00000595786 NEK1Q96PY6 1258 aa29.35■■■□□ 2.29
ZNF558-203ENST00000595786 MYL10Q9BUA6 226 aa29.35■■■□□ 2.29
ZNF558-203ENST00000595786 SEC63Q9UGP8 760 aaKnown RBP29.35■■■□□ 2.29
ZNF558-203ENST00000595786 MYCLP12524 364 aaPredicted RBP29.34■■■□□ 2.29
ZNF558-203ENST00000595786 CCND2P30279 289 aa29.34■■■□□ 2.29
ZNF558-203ENST00000595786 RASIP1Q5U651 963 aa29.34■■■□□ 2.29
ZNF558-203ENST00000595786 STAM2O75886 525 aa29.33■■■□□ 2.29
ZNF558-203ENST00000595786 RGS20O76081 388 aa29.33■■■□□ 2.29
ZNF558-203ENST00000595786 KRT32Q14532 448 aa29.33■■■□□ 2.29
ZNF558-203ENST00000595786 DGKDQ16760 1214 aa29.33■■■□□ 2.29
ZNF558-203ENST00000595786 FCHSD1Q86WN1 690 aa29.33■■■□□ 2.29
ZNF558-203ENST00000595786 RPUSD2Q8IZ73 545 aaKnown RBP29.33■■■□□ 2.29
ZNF558-203ENST00000595786 SRBD1Q8N5C6 995 aaKnown RBP29.33■■■□□ 2.29
ZNF558-203ENST00000595786 TRMT13Q9NUP7 481 aaKnown RBP29.33■■■□□ 2.29
ZNF558-203ENST00000595786 FRMPD4Q14CM0 1322 aa29.32■■■□□ 2.28
ZNF558-203ENST00000595786 COL9A3Q14050 684 aaPredicted RBP29.32■■■□□ 2.28
ZNF558-203ENST00000595786 SYNE3Q6ZMZ3 975 aa29.32■■■□□ 2.28
ZNF558-203ENST00000595786 ZNF365Q70YC5 407 aa29.32■■■□□ 2.28
ZNF558-203ENST00000595786 SESTD1Q86VW0 696 aa29.32■■■□□ 2.28
ZNF558-203ENST00000595786 DHX37Q8IY37 1157 aaKnown RBP29.32■■■□□ 2.28
ZNF558-203ENST00000595786 FANCBQ8NB91 859 aa29.32■■■□□ 2.28
ZNF558-203ENST00000595786 PPTC7Q8NI37 304 aa29.32■■■□□ 2.28
ZNF558-203ENST00000595786 UMODL1Q5DID0 1318 aa29.31■■■□□ 2.28
ZNF558-203ENST00000595786 PIK3CDO00329 1044 aa29.31■■■□□ 2.28
ZNF558-203ENST00000595786 EXOSC10Q01780 885 aaKnown RBP29.31■■■□□ 2.28
ZNF558-203ENST00000595786 FAM47CQ5HY64 1035 aa29.31■■■□□ 2.28
ZNF558-203ENST00000595786 DHX32Q7L7V1 743 aaKnown RBP29.31■■■□□ 2.28
ZNF558-203ENST00000595786 PIBF1Q8WXW3 757 aa29.31■■■□□ 2.28
ZNF558-203ENST00000595786 HERVK_113Q902F9 699 aa29.31■■■□□ 2.28
ZNF558-203ENST00000595786 CUL5Q93034 780 aa29.31■■■□□ 2.28
ZNF558-203ENST00000595786 MTIF3Q9H2K0 278 aaKnown RBP29.31■■■□□ 2.28
ZNF558-203ENST00000595786 SEMA6BQ9H3T3 888 aa29.31■■■□□ 2.28
ZNF558-203ENST00000595786 PLEKHA8P1O95397 391 aa29.3■■■□□ 2.28
ZNF558-203ENST00000595786 FGBP02675 491 aa29.3■■■□□ 2.28
ZNF558-203ENST00000595786 XRRA1Q6P2D8 792 aa29.3■■■□□ 2.28
ZNF558-203ENST00000595786 WNT8AQ9H1J5 351 aa29.3■■■□□ 2.28
ZNF558-203ENST00000595786 PPFIA4O75335 1185 aa29.29■■■□□ 2.28
ZNF558-203ENST00000595786 HMGB1P09429 215 aaKnown RBP29.29■■■□□ 2.28
ZNF558-203ENST00000595786 ACRP10323 421 aa29.29■■■□□ 2.28
ZNF558-203ENST00000595786 HOXD8P13378 290 aaPredicted RBP29.29■■■□□ 2.28
ZNF558-203ENST00000595786 CCL23P55773 120 aa29.29■■■□□ 2.28
ZNF558-203ENST00000595786 CELF3Q5SZQ8 465 aaKnown RBP29.29■■■□□ 2.28
ZNF558-203ENST00000595786 MYSM1Q5VVJ2 828 aa29.29■■■□□ 2.28
ZNF558-203ENST00000595786 IL31RAQ8NI17 732 aa29.29■■■□□ 2.28
ZNF558-203ENST00000595786 KAT2BQ92831 832 aa29.29■■■□□ 2.28
ZNF558-203ENST00000595786 KATNAL1Q9BW62 490 aa29.29■■■□□ 2.28
ZNF558-203ENST00000595786 LRRC2Q9BYS8 371 aa29.29■■■□□ 2.28
ZNF558-203ENST00000595786 MYH7BA7E2Y1 1941 aa29.28■■■□□ 2.28
ZNF558-203ENST00000595786 PITPNM1O00562 1244 aa29.28■■■□□ 2.28
ZNF558-203ENST00000595786 PFKMP08237 780 aa29.28■■■□□ 2.28
ZNF558-203ENST00000595786 CYP2C9P11712 490 aa29.28■■■□□ 2.28
ZNF558-203ENST00000595786 GNPTABQ3T906 1256 aa29.28■■■□□ 2.28
ZNF558-203ENST00000595786 TMTC3Q6ZXV5 915 aa29.28■■■□□ 2.28
ZNF558-203ENST00000595786 SMARCC2Q8TAQ2 1214 aa29.28■■■□□ 2.28
ZNF558-203ENST00000595786 GUCD1Q96NT3 240 aa29.28■■■□□ 2.28
ZNF558-203ENST00000595786 RXRAP19793 462 aa29.27■■■□□ 2.28
ZNF558-203ENST00000595786 ICAM3P32942 547 aa29.27■■■□□ 2.28
ZNF558-203ENST00000595786 RASEFQ8IZ41 740 aa29.27■■■□□ 2.28
ZNF558-203ENST00000595786 INPP4AQ96PE3 977 aaPredicted RBP29.27■■■□□ 2.28
ZNF558-203ENST00000595786 RBM28Q9NW13 759 aaKnown RBP29.27■■■□□ 2.28
ZNF558-203ENST00000595786 MEIS2O14770 477 aa29.26■■■□□ 2.27
ZNF558-203ENST00000595786 RFC2P35250 354 aa29.26■■■□□ 2.27
ZNF558-203ENST00000595786 BFSP2Q13515 415 aa29.26■■■□□ 2.27
ZNF558-203ENST00000595786 APOA5Q6Q788 366 aa29.26■■■□□ 2.27
ZNF558-203ENST00000595786 TEX2Q8IWB9 1127 aa29.26■■■□□ 2.27
ZNF558-203ENST00000595786 KCNB2Q92953 911 aa29.26■■■□□ 2.27
ZNF558-203ENST00000595786 NOD1Q9Y239 953 aa29.26■■■□□ 2.27
ZNF558-203ENST00000595786 GGPS1O95749 300 aa29.25■■■□□ 2.27
ZNF558-203ENST00000595786 F2P00734 622 aa29.25■■■□□ 2.27
ZNF558-203ENST00000595786 MRPS9P82933 396 aaKnown RBP29.25■■■□□ 2.27
ZNF558-203ENST00000595786 RETREG2Q8NC44 543 aa29.25■■■□□ 2.27
ZNF558-203ENST00000595786 FAM161BQ96MY7 647 aa29.25■■■□□ 2.27
ZNF558-203ENST00000595786 SPATA33Q96N06 139 aa29.25■■■□□ 2.27
ZNF558-203ENST00000595786 TTYH1Q9H313 450 aaPredicted RBP29.25■■■□□ 2.27
ZNF558-203ENST00000595786 PSTPIP2Q9H939 334 aa29.25■■■□□ 2.27
ZNF558-203ENST00000595786 HAS3O00219 553 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 UBA1P22314 1058 aaKnown RBP29.24■■■□□ 2.27
ZNF558-203ENST00000595786 DNAJB2P25686 324 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 PSEN2P49810 448 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 RCAN1P53805 252 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 SP2Q02086 613 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 ADCK5Q3MIX3 580 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms