RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ARRDC4Q8NCT1 418 aa16.44■□□□□ 0.22
LIG1-208ENST00000595758 TMEM260Q9NX78 707 aa16.44■□□□□ 0.22
LIG1-208ENST00000595758 ADCY6O43306 1168 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
LIG1-208ENST00000595758 TTLL4Q14679 1199 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 DUSP28Q4G0W2 176 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 PCNX4Q63HM2 1172 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 GALNT17Q6IS24 598 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 ANKLE1Q8NAG6 615 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 ZFP91Q96JP5 570 aaPredicted RBP16.43■□□□□ 0.22
LIG1-208ENST00000595758 ANO3Q9BYT9 981 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 PCDHA4Q9UN74 947 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 KCNJ14Q9UNX9 436 aa16.43■□□□□ 0.22
LIG1-208ENST00000595758 ADAMTS3O15072 1205 aa16.42■□□□□ 0.22
LIG1-208ENST00000595758 STAM2O75886 525 aa16.42■□□□□ 0.22
LIG1-208ENST00000595758 FARP2O94887 1054 aaPredicted RBP16.42■□□□□ 0.22
LIG1-208ENST00000595758 PGK1P00558 417 aa16.42■□□□□ 0.22
LIG1-208ENST00000595758 TXNP10599 105 aaKnown RBP16.42■□□□□ 0.22
LIG1-208ENST00000595758 MRPS9P82933 396 aaKnown RBP16.42■□□□□ 0.22
LIG1-208ENST00000595758 HMGN5P82970 282 aaKnown RBP16.42■□□□□ 0.22
LIG1-208ENST00000595758 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
LIG1-208ENST00000595758 PGBD1Q96JS3 809 aa16.42■□□□□ 0.22
LIG1-208ENST00000595758 AP5M1Q9H0R1 490 aa16.42■□□□□ 0.22
LIG1-208ENST00000595758 SPC25Q9HBM1 224 aa16.42■□□□□ 0.22
LIG1-208ENST00000595758 RTEL1Q9NZ71 1219 aa16.42■□□□□ 0.22
LIG1-208ENST00000595758 GNEQ9Y223 722 aaKnown RBP16.42■□□□□ 0.22
LIG1-208ENST00000595758 NKRFO15226 690 aaKnown RBP eCLIP16.41■□□□□ 0.22
LIG1-208ENST00000595758 DYNC1LI2O43237 492 aaPredicted RBP16.41■□□□□ 0.22
LIG1-208ENST00000595758 RGS20O76081 388 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 LRRC41Q15345 812 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 GJC2Q5T442 439 aaPredicted RBP16.41■□□□□ 0.22
LIG1-208ENST00000595758 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 RNF180Q86T96 592 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 TLK2Q86UE8 772 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 BLIDQ8IZY5 108 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 DAGLBQ8NCG7 672 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 RASGRP4Q8TDF6 673 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 PHF20Q9BVI0 1012 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 UPF3AQ9H1J1 476 aaKnown RBP16.41■□□□□ 0.22
LIG1-208ENST00000595758 GJB4Q9NTQ9 266 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 Q9Y3F1 56 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 MRVI1Q9Y6F6 885 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 LRRC37A2A6NM11 1700 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
LIG1-208ENST00000595758 KBTBD13C9JR72 458 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 DNM1LO00429 736 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 ADAMTS4O75173 837 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 ARIH2O95376 493 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 C6orf222P0C671 652 aaPredicted RBP16.4■□□□□ 0.22
LIG1-208ENST00000595758 PTGS1P23219 599 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 SREBF1P36956 1147 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 RGS19P49795 217 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 MNX1P50219 401 aaPredicted RBP16.4■□□□□ 0.22
LIG1-208ENST00000595758 GJA9P57773 515 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 TRIM29Q14134 588 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 NPY5RQ15761 445 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 GNPTABQ3T906 1256 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 NLRX1Q86UT6 975 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 FAM184AQ8NB25 1140 aa16.4■□□□□ 0.22
LIG1-208ENST00000595758 PAWRQ96IZ0 340 aaKnown RBP16.4■□□□□ 0.22
LIG1-208ENST00000595758 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
LIG1-208ENST00000595758 DDX41Q9UJV9 622 aaKnown RBP16.4■□□□□ 0.22
LIG1-208ENST00000595758 SPATA31C2B4DYI2 1134 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 TGFB3P10600 412 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 FOSBP53539 338 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 LY6KQ17RY6 165 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 GNASQ5JWF2 1037 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 NECAB2Q7Z6G3 386 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 UBE2Q1Q7Z7E8 422 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 DIS3LQ8TF46 1054 aaKnown RBP16.39■□□□□ 0.21
LIG1-208ENST00000595758 UBIAD1Q9Y5Z9 338 aa16.39■□□□□ 0.21
LIG1-208ENST00000595758 MYADML2A6NDP7 307 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 M0R2N6 131 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 FIBPO43427 364 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 ITGB5P18084 799 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 CST5P28325 142 aaPredicted RBP16.38■□□□□ 0.21
LIG1-208ENST00000595758 ICAM3P32942 547 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 ZNF76P36508 570 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 NKX3-2P78367 333 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 IRX5P78411 483 aaPredicted RBP16.38■□□□□ 0.21
LIG1-208ENST00000595758 FSCN1Q16658 493 aaKnown RBP16.38■□□□□ 0.21
LIG1-208ENST00000595758 OR6J1Q8NGC5 347 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 COPS5Q92905 334 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 GPRASP2Q96D09 838 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 C8orf76Q96K31 380 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 TSEN34Q9BSV6 310 aaKnown RBP16.38■□□□□ 0.21
LIG1-208ENST00000595758 C11orf49Q9H6J7 331 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
LIG1-208ENST00000595758 CTAGE5O15320 804 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 GH1P01241 217 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 CYP3A4P08684 503 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 BEX3Q00994 111 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 KCNA10Q16322 511 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 CEP55Q53EZ4 464 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 KRT40Q6A162 431 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms