RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 LENG9Q96B70 501 aa16.32■□□□□ 0.2
PAF1-204ENST00000595564 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
PAF1-204ENST00000595564 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
PAF1-204ENST00000595564 PPP2R3BQ9Y5P8 575 aa16.32■□□□□ 0.2
PAF1-204ENST00000595564 SMCHD1A6NHR9 2005 aa16.32■□□□□ 0.2
PAF1-204ENST00000595564 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 DDNO94850 711 aaPredicted RBP16.31■□□□□ 0.2
PAF1-204ENST00000595564 PTPRAP18433 802 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 VCAM1P19320 739 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 STAT3P40763 770 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 ECM1Q16610 540 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
PAF1-204ENST00000595564 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 EHMT1Q9H9B1 1298 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 EXOC1Q9NV70 894 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 ZNF536O15090 1300 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 FLOT1O75955 427 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 PDE4DQ08499 809 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 STIM1Q13586 685 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 NOLC1Q14978 699 aaKnown RBP eCLIP16.31■□□□□ 0.2
PAF1-204ENST00000595564 KCNK18Q7Z418 384 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 ADSSL1Q8N142 457 aa16.31■□□□□ 0.2
PAF1-204ENST00000595564 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
PAF1-204ENST00000595564 SBF1O95248 1867 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 MYMKA6NI61 221 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 MSH4O15457 936 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 HYIQ5T013 277 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 CDKAL1Q5VV42 579 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 VSTM4Q8IW00 320 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 CPXCR1Q8N123 301 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 ZNF280CQ8ND82 737 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 CYP2W1Q8TAV3 490 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 UBE2Q2Q8WVN8 375 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 FAM20AQ96MK3 541 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 NT5C3AQ9H0P0 336 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 INTS13Q9NVM9 706 aa16.3■□□□□ 0.2
PAF1-204ENST00000595564 BACE1P56817 501 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 UBXN2AP68543 259 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 NCAPH2Q6IBW4 605 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 KLRG1Q96E93 195 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 SLC38A10Q9HBR0 1119 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 RAVER2Q9HCJ3 691 aaKnown RBP16.29■□□□□ 0.2
PAF1-204ENST00000595564 PPP1R9AQ9ULJ8 1098 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 KIAA1024Q9UPX6 916 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 CTDP1Q9Y5B0 961 aaPredicted RBP16.29■□□□□ 0.2
PAF1-204ENST00000595564 SLC26A4O43511 780 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 PTPN21Q16825 1174 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 SUPT20HL1Q3ZLR7 823 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 DYMQ7RTS9 669 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 ERMNQ8TAM6 284 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
PAF1-204ENST00000595564 IGLV3-22A0A075B6J6 115 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 POTEB3A0JP26 581 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 POTECB2RU33 542 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 PSMA7O14818 248 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 OFD1O75665 1012 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 ALAS1P13196 640 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 SPIRE1Q08AE8 756 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 PRKG1Q13976 671 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 POTEBQ6S5H4 581 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 UNC13DQ70J99 1090 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 GTPBP4Q9BZE4 634 aaKnown RBP16.28■□□□□ 0.2
PAF1-204ENST00000595564 ADARB2Q9NS39 739 aaKnown RBP16.28■□□□□ 0.2
PAF1-204ENST00000595564 SSC5DA1L4H1 1573 aa16.28■□□□□ 0.2
PAF1-204ENST00000595564 A0A1B0GTH6 734 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 PVALEFA0A1B0GWK0 134 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 TRIM49BA6NDI0 452 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 E9PMD0 336 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 NFIBO00712 420 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 ZBED4O75132 1171 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 MED24O75448 989 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 SSBP05455 408 aaKnown RBP eCLIP16.27■□□□□ 0.2
PAF1-204ENST00000595564 FCER1AP12319 257 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 SKILP12757 684 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.2
PAF1-204ENST00000595564 HSD17B4P51659 736 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 STK4Q13043 487 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 ARMCX5Q6P1M9 558 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.27■□□□□ 0.2
PAF1-204ENST00000595564 APTXQ7Z2E3 356 aaKnown RBP16.27■□□□□ 0.2
PAF1-204ENST00000595564 MCF2L2Q86YR7 1114 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 CLEC4DQ8WXI8 215 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 DDX12PQ92771 950 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 SPTLC3Q9NUV7 552 aa16.27■□□□□ 0.2
PAF1-204ENST00000595564 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.19
PAF1-204ENST00000595564 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.19
PAF1-204ENST00000595564 HMGCS2P54868 508 aa16.26■□□□□ 0.19
PAF1-204ENST00000595564 CCZ1BP86790 482 aa16.26■□□□□ 0.19
PAF1-204ENST00000595564 CCZ1P86791 482 aaPredicted RBP16.26■□□□□ 0.19
PAF1-204ENST00000595564 NR1I3Q14994 352 aa16.26■□□□□ 0.19
PAF1-204ENST00000595564 DHTKD1Q96HY7 919 aaPredicted RBP16.26■□□□□ 0.19
PAF1-204ENST00000595564 CTAGE1Q96RT6 745 aa16.26■□□□□ 0.19
PAF1-204ENST00000595564 HOMER2Q9NSB8 354 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms