RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 DEFB128Q7Z7B8 93 aa18.81■□□□□ 0.6
CAPN12-203ENST00000594497 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
CAPN12-203ENST00000594497 MAP3K20Q9NYL2 800 aaKnown RBP18.81■□□□□ 0.6
CAPN12-203ENST00000594497 YBX2Q9Y2T7 364 aaKnown RBP18.81■□□□□ 0.6
CAPN12-203ENST00000594497 ERICH2A1L162 156 aa18.8■□□□□ 0.6
CAPN12-203ENST00000594497 PPP1R11O60927 126 aaPredicted RBP18.8■□□□□ 0.6
CAPN12-203ENST00000594497 ACTN1P12814 892 aa18.8■□□□□ 0.6
CAPN12-203ENST00000594497 CASTP20810 708 aaKnown RBP18.8■□□□□ 0.6
CAPN12-203ENST00000594497 CHST3Q7LGC8 479 aa18.8■□□□□ 0.6
CAPN12-203ENST00000594497 USP38Q8NB14 1042 aa18.8■□□□□ 0.6
CAPN12-203ENST00000594497 DDX41Q9UJV9 622 aaKnown RBP18.8■□□□□ 0.6
CAPN12-203ENST00000594497 PCDHA1Q9Y5I3 950 aa18.8■□□□□ 0.6
CAPN12-203ENST00000594497 SPTBN5Q9NRC6 3674 aaKnown RBP18.8■□□□□ 0.6
CAPN12-203ENST00000594497 IFIT3O14879 490 aaKnown RBP18.79■□□□□ 0.6
CAPN12-203ENST00000594497 ATP2A2P16615 1042 aaKnown RBP18.79■□□□□ 0.6
CAPN12-203ENST00000594497 RABGGTBP53611 331 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 TRAF1Q13077 416 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 GRM4Q14833 912 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 PTGISQ16647 500 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 DGKDQ16760 1214 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 RALYLQ86SE5 291 aaKnown RBP18.79■□□□□ 0.6
CAPN12-203ENST00000594497 SESTD1Q86VW0 696 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 SAMD3Q8N6K7 520 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 EMID1Q96A84 441 aaPredicted RBP18.79■□□□□ 0.6
CAPN12-203ENST00000594497 PCDHA11Q9Y5I1 949 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 MRVI1Q9Y6F6 885 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 TET1Q8NFU7 2136 aa18.79■□□□□ 0.6
CAPN12-203ENST00000594497 REV3LO60673 3130 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 IQCF3P0C7M6 154 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 SART3Q15020 963 aaKnown RBP18.78■□□□□ 0.6
CAPN12-203ENST00000594497 PPP2R2DQ66LE6 453 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 STOX1Q6ZVD7 989 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 HOMER1Q86YM7 354 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 NCOA7Q8NI08 942 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 KAT2BQ92831 832 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 PDCD2LQ9BRP1 358 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 RIOX1Q9H6W3 641 aa18.78■□□□□ 0.6
CAPN12-203ENST00000594497 E7EWF7 191 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 SGSM2O43147 1006 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 MYCLP12524 364 aaPredicted RBP18.77■□□□□ 0.6
CAPN12-203ENST00000594497 MYOGP15173 224 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 LAMC2Q13753 1193 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 WTAPQ15007 396 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 GDF6Q6KF10 455 aaPredicted RBP18.77■□□□□ 0.6
CAPN12-203ENST00000594497 KCNV1Q6PIU1 500 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 DHX37Q8IY37 1157 aaKnown RBP18.77■□□□□ 0.6
CAPN12-203ENST00000594497 CAGE1Q8TC20 777 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 PIGSQ96S52 555 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 KATNAL1Q9BW62 490 aa18.77■□□□□ 0.6
CAPN12-203ENST00000594497 FTOQ9C0B1 505 aaKnown RBP eCLIP18.77■□□□□ 0.6
CAPN12-203ENST00000594497 TRANK1O15050 2925 aa18.77■□□□□ 0.59
CAPN12-203ENST00000594497 HOXA13P31271 388 aaPredicted RBP18.76■□□□□ 0.59
CAPN12-203ENST00000594497 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
CAPN12-203ENST00000594497 ADGRE1Q14246 886 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 PGM5Q15124 567 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 SLC35G1Q2M3R5 365 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 PPTC7Q8NI37 304 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 AFAP1L1Q8TED9 768 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 PPM1EQ8WY54 764 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 SYMPKQ92797 1274 aaKnown RBP18.76■□□□□ 0.59
CAPN12-203ENST00000594497 SLC9A7Q96T83 725 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 SENP2Q9HC62 589 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 PTPRSQ13332 1948 aa18.76■□□□□ 0.59
CAPN12-203ENST00000594497 GCOM1H8Y6P7 765 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-203ENST00000594497 RGS20O76081 388 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 F2P00734 622 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 POLR2MP0CAP2 368 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 IGFBP4P22692 258 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 TROAPQ12815 778 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 TMEM67Q5HYA8 995 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 VSIG10LQ86VR7 867 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 C7orf31Q8N865 590 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 CTAGE1Q96RT6 745 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 GTF2IRD1Q9UHL9 959 aa18.75■□□□□ 0.59
CAPN12-203ENST00000594497 PNMA6FA0A0J9YX94 578 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 CYTH3O43739 400 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 BAIAP3O94812 1187 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 ZNF286BP0CG31 522 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 CCND2P30279 289 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 PSEN2P49810 448 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 MFSD10Q14728 455 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 CATIPQ7Z7H3 387 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 IL31RAQ8NI17 732 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 PHOSPHO2Q8TCD6 241 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 ALG1Q9BT22 464 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 HDAC6Q9UBN7 1215 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 MUC3AQ02505 3323 aa18.74■□□□□ 0.59
CAPN12-203ENST00000594497 TGFB3P10600 412 aa18.73■□□□□ 0.59
CAPN12-203ENST00000594497 HOXD8P13378 290 aaPredicted RBP18.73■□□□□ 0.59
CAPN12-203ENST00000594497 SELPP16109 830 aa18.73■□□□□ 0.59
CAPN12-203ENST00000594497 RBL2Q08999 1139 aa18.73■□□□□ 0.59
CAPN12-203ENST00000594497 KIAA0753Q2KHM9 967 aa18.73■□□□□ 0.59
CAPN12-203ENST00000594497 TJAP1Q5JTD0 557 aa18.73■□□□□ 0.59
CAPN12-203ENST00000594497 CELF3Q5SZQ8 465 aaKnown RBP18.73■□□□□ 0.59
CAPN12-203ENST00000594497 MYSM1Q5VVJ2 828 aa18.73■□□□□ 0.59
CAPN12-203ENST00000594497 LRRC8DQ7L1W4 858 aa18.73■□□□□ 0.59
CAPN12-203ENST00000594497 FCHSD1Q86WN1 690 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms