RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.32
DDX39A-221ENST00000593026 IQSEC1Q6DN90 963 aa17.08■□□□□ 0.32
DDX39A-221ENST00000593026 BLIDQ8IZY5 108 aa17.08■□□□□ 0.32
DDX39A-221ENST00000593026 DAGLBQ8NCG7 672 aa17.08■□□□□ 0.32
DDX39A-221ENST00000593026 GJB4Q9NTQ9 266 aa17.08■□□□□ 0.32
DDX39A-221ENST00000593026 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-221ENST00000593026 RBM47A0AV96 593 aaKnown RBP17.07■□□□□ 0.32
DDX39A-221ENST00000593026 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-221ENST00000593026 STAM2O75886 525 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 FOSBP53539 338 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 TNFAIP2Q03169 654 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 NPY5RQ15761 445 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 SEPT14Q6ZU15 432 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 SCFD2Q8WU76 684 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 SNX21Q969T3 373 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 LENG1Q96BZ8 264 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-221ENST00000593026 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-221ENST00000593026 WDR11Q9BZH6 1224 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 CRISPLD2Q9H0B8 497 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 XPNPEP3Q9NQH7 507 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 OGDHLQ9ULD0 1010 aa17.07■□□□□ 0.32
DDX39A-221ENST00000593026 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-221ENST00000593026 KIAA1217Q5T5P2 1943 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 ADCY6O43306 1168 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 DUSP11O75319 330 aaKnown RBP17.06■□□□□ 0.32
DDX39A-221ENST00000593026 CAPN2P17655 700 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 EN2P19622 333 aaPredicted RBP17.06■□□□□ 0.32
DDX39A-221ENST00000593026 SREBF1P36956 1147 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 MRPS9P82933 396 aaKnown RBP17.06■□□□□ 0.32
DDX39A-221ENST00000593026 TTLL4Q14679 1199 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 GNPTABQ3T906 1256 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 C8orf76Q96K31 380 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 BRMS1Q9HCU9 246 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 RTEL1Q9NZ71 1219 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 KIF3AQ9Y496 699 aa17.06■□□□□ 0.32
DDX39A-221ENST00000593026 KIAA0100Q14667 2235 aaKnown RBP17.05■□□□□ 0.32
DDX39A-221ENST00000593026 RGS20O76081 388 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 TXNP10599 105 aaKnown RBP17.05■□□□□ 0.32
DDX39A-221ENST00000593026 SMPD1P17405 629 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 ARHGAP4P98171 946 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 CUL4AQ13619 759 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 DUSP28Q4G0W2 176 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 KRT40Q6A162 431 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 INPP4AQ96PE3 977 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-221ENST00000593026 SMC3Q9UQE7 1217 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 MRVI1Q9Y6F6 885 aa17.05■□□□□ 0.32
DDX39A-221ENST00000593026 SYNRGQ9UMZ2 1314 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 M0R2N6 131 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 PGK1P00558 417 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 MMP1P03956 469 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-221ENST00000593026 KRT2P35908 639 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 KCNV1Q6PIU1 500 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 TLK2Q86UE8 772 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 NLRX1Q86UT6 975 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 ARRDC4Q8NCT1 418 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 SPC25Q9HBM1 224 aa17.04■□□□□ 0.32
DDX39A-221ENST00000593026 GNEQ9Y223 722 aaKnown RBP17.04■□□□□ 0.32
DDX39A-221ENST00000593026 NKRFO15226 690 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX39A-221ENST00000593026 FIBPO43427 364 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 ARIH2O95376 493 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 GJB2P29033 226 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 GUCY1B3Q02153 619 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 NONOQ15233 471 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX39A-221ENST00000593026 TMEM63BQ5T3F8 832 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 GJC2Q5T442 439 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-221ENST00000593026 CCDC62Q6P9F0 684 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 KRT25Q7Z3Z0 450 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 RNF180Q86T96 592 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 ANKLE1Q8NAG6 615 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 AP5M1Q9H0R1 490 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
DDX39A-221ENST00000593026 BRCA2P51587 3418 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 CCDC194A0A1B0GVG4 234 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 KBTBD13C9JR72 458 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 DYNC1LI2O43237 492 aaPredicted RBP17.02■□□□□ 0.32
DDX39A-221ENST00000593026 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 FARP2O94887 1054 aaPredicted RBP17.02■□□□□ 0.32
DDX39A-221ENST00000593026 CYP3A4P08684 503 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 C6orf222P0C671 652 aaPredicted RBP17.02■□□□□ 0.32
DDX39A-221ENST00000593026 TGFB3P10600 412 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 ITGB5P18084 799 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 PTGS1P23219 599 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 ICAM3P32942 547 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 ZNF76P36508 570 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 GJA9P57773 515 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 LRRC41Q15345 812 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDX39A-221ENST00000593026 LY6KQ17RY6 165 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 DIS3L2Q8IYB7 885 aaKnown RBP17.02■□□□□ 0.32
DDX39A-221ENST00000593026 TBCKQ8TEA7 893 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 CRYGNQ8WXF5 182 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 GPRASP2Q96D09 838 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 CDHR1Q96JP9 859 aa17.02■□□□□ 0.32
DDX39A-221ENST00000593026 UPF3AQ9H1J1 476 aaKnown RBP17.02■□□□□ 0.32
DDX39A-221ENST00000593026 DDX41Q9UJV9 622 aaKnown RBP17.02■□□□□ 0.32
DDX39A-221ENST00000593026 Q9Y3F1 56 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms