RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 RFX7Q2KHR2 1363 aa16.02■□□□□ 0.16
RAVER1-204ENST00000592208 ASNSP08243 561 aa16.02■□□□□ 0.16
RAVER1-204ENST00000592208 EXOC3L4Q17RC7 722 aa16.02■□□□□ 0.16
RAVER1-204ENST00000592208 GEN1Q17RS7 908 aa16.02■□□□□ 0.16
RAVER1-204ENST00000592208 ODR4Q5SWX8 454 aa16.02■□□□□ 0.16
RAVER1-204ENST00000592208 DENND2CQ68D51 928 aa16.02■□□□□ 0.16
RAVER1-204ENST00000592208 HOMER3Q9NSC5 361 aa16.02■□□□□ 0.16
RAVER1-204ENST00000592208 TECPR2O15040 1411 aa16.02■□□□□ 0.16
RAVER1-204ENST00000592208 SH2B2O14492 632 aaPredicted RBP16.02■□□□□ 0.15
RAVER1-204ENST00000592208 RIOK3O14730 519 aaKnown RBP16.02■□□□□ 0.15
RAVER1-204ENST00000592208 GH2P01242 217 aa16.02■□□□□ 0.15
RAVER1-204ENST00000592208 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.15
RAVER1-204ENST00000592208 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.15
RAVER1-204ENST00000592208 CPDO75976 1380 aa16.02■□□□□ 0.15
RAVER1-204ENST00000592208 CHRNA5P30532 468 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 MKRN3Q13064 507 aaKnown RBP16.01■□□□□ 0.15
RAVER1-204ENST00000592208 SURF1Q15526 300 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 COA7Q96BR5 231 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 NT5C1BQ96P26 610 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 PHLPP2Q6ZVD8 1323 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 KLHL7Q8IXQ5 586 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 TDRD7Q8NHU6 1098 aaKnown RBP16.01■□□□□ 0.15
RAVER1-204ENST00000592208 GSDMBQ8TAX9 411 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 TSC1Q92574 1164 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 WDR19Q8NEZ3 1342 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 RC3H1Q5TC82 1133 aaKnown RBP16.01■□□□□ 0.15
RAVER1-204ENST00000592208 PSMC2P35998 433 aaKnown RBP16.01■□□□□ 0.15
RAVER1-204ENST00000592208 BARGINQ6ZT62 677 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 SLC10A4Q96EP9 437 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.01■□□□□ 0.15
RAVER1-204ENST00000592208 RNF14Q9UBS8 474 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 PCDHA5Q9Y5H7 936 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 EPN1Q9Y6I3 576 aaPredicted RBP16.01■□□□□ 0.15
RAVER1-204ENST00000592208 SPATA31A5Q5VU36 1347 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 SPATA31A7Q8IWB4 1347 aa16.01■□□□□ 0.15
RAVER1-204ENST00000592208 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 STAM2O75886 525 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 CYP2D6P10635 497 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 DNAJC21Q5F1R6 531 aaKnown RBP16■□□□□ 0.15
RAVER1-204ENST00000592208 GPIHBP1Q8IV16 184 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 ACCSQ96QU6 501 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 NOL3O60936 208 aaKnown RBP16■□□□□ 0.15
RAVER1-204ENST00000592208 KRT15P19012 456 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 RASSF2P50749 326 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 COPB1P53618 953 aaKnown RBP16■□□□□ 0.15
RAVER1-204ENST00000592208 GPSM2P81274 684 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 TRIM50Q86XT4 487 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 RNF169Q8NCN4 708 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 RNF181Q9P0P0 153 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 MMP1P03956 469 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 NSFP46459 744 aaKnown RBP16■□□□□ 0.15
RAVER1-204ENST00000592208 ORC2Q13416 577 aaPredicted RBP16■□□□□ 0.15
RAVER1-204ENST00000592208 MIS18BP1Q6P0N0 1132 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 CCDC62Q6P9F0 684 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 PGBD1Q96JS3 809 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 ABT1Q9ULW3 272 aaKnown RBP16■□□□□ 0.15
RAVER1-204ENST00000592208 HMGB1P1B2RPK0 211 aaPredicted RBP16■□□□□ 0.15
RAVER1-204ENST00000592208 CAPN9O14815 690 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 RNF40O75150 1001 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 NDUFA8P51970 172 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 NEDD9Q14511 834 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 NECTIN1Q15223 517 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 TMEM179Q6ZVK1 233 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 ZNF577Q9BSK1 485 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 ZNF341Q9BYN7 854 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 ST7Q9NRC1 585 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 FANCLQ9NW38 375 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 DDX41Q9UJV9 622 aaKnown RBP16■□□□□ 0.15
RAVER1-204ENST00000592208 KIAA1024Q9UPX6 916 aa16■□□□□ 0.15
RAVER1-204ENST00000592208 SH3BP5O60239 455 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 ATP11AP98196 1134 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
RAVER1-204ENST00000592208 R3HDM1Q15032 1099 aaKnown RBP15.99■□□□□ 0.15
RAVER1-204ENST00000592208 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 CACNA2D3Q8IZS8 1091 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 CACTINQ8WUQ7 758 aaKnown RBP15.99■□□□□ 0.15
RAVER1-204ENST00000592208 FAM193BQ96PV7 902 aaPredicted RBP15.99■□□□□ 0.15
RAVER1-204ENST00000592208 SPON1Q9HCB6 807 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 CLIC4Q9Y696 253 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 EFCAB8A8MWE9 144 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 HSPA6P17066 643 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 HPDP32754 393 aaPredicted RBP15.99■□□□□ 0.15
RAVER1-204ENST00000592208 FOXO4P98177 505 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 MAN2A1Q16706 1144 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 C10orf76Q5T2E6 689 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 FAM196BA6NMK8 535 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 SEMA3FQ13275 785 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 ZNF827Q17R98 1081 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 KRT71Q3SY84 523 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 POMGNT1Q8WZA1 660 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 P2RX5Q93086 422 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 TUBGCP2Q9BSJ2 902 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 PPP2R2CQ9Y2T4 447 aa15.99■□□□□ 0.15
RAVER1-204ENST00000592208 GOLGA8CPA6NN73 597 aa15.98■□□□□ 0.15
RAVER1-204ENST00000592208 TLR3O15455 904 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms