RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PRC1O43663 620 aa13.06□□□□□ -0.32
SMAD4-211ENST00000590499 FUT2Q10981 343 aa13.06□□□□□ -0.32
SMAD4-211ENST00000590499 NFX1Q12986 1120 aaKnown RBP13.06□□□□□ -0.32
SMAD4-211ENST00000590499 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
SMAD4-211ENST00000590499 ANO1Q5XXA6 986 aa13.06□□□□□ -0.32
SMAD4-211ENST00000590499 NSMFQ6X4W1 530 aa13.06□□□□□ -0.32
SMAD4-211ENST00000590499 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
SMAD4-211ENST00000590499 MORC4Q8TE76 937 aa13.06□□□□□ -0.32
SMAD4-211ENST00000590499 TOR4AQ9NXH8 423 aa13.06□□□□□ -0.32
SMAD4-211ENST00000590499 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 KLRF2D3W0D1 207 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 H0YGN5 161 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 DNM1LO00429 736 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 SH2B2O14492 632 aaPredicted RBP13.05□□□□□ -0.32
SMAD4-211ENST00000590499 AKR1A1P14550 325 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 MCM5P33992 734 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 BAATQ14032 418 aaPredicted RBP13.05□□□□□ -0.32
SMAD4-211ENST00000590499 QRICH1Q2TAL8 776 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 SLC30A10Q6XR72 485 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 KCNB2Q92953 911 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 PURBQ96QR8 312 aaKnown RBP13.05□□□□□ -0.32
SMAD4-211ENST00000590499 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 LAMA3Q16787 3333 aa13.05□□□□□ -0.32
SMAD4-211ENST00000590499 ASB14A6NK59 587 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 ADCY6O43306 1168 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 CYTH3O43739 400 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 ADAMTS4O75173 837 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 DDAH1O94760 285 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 RARBP10826 455 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 LIFRP42702 1097 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 RPS6P62753 249 aaKnown RBP13.04□□□□□ -0.32
SMAD4-211ENST00000590499 LRRC41Q15345 812 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 USH1GQ495M9 461 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 RNF20Q5VTR2 975 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 ARRDC4Q8NCT1 418 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 DPF3Q92784 378 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 LENG1Q96BZ8 264 aaPredicted RBP13.04□□□□□ -0.32
SMAD4-211ENST00000590499 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 MAP3K14Q99558 947 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 MAF1Q9H063 256 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 RIOX1Q9H6W3 641 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
SMAD4-211ENST00000590499 DDX49Q9Y6V7 483 aaKnown RBP13.04□□□□□ -0.32
SMAD4-211ENST00000590499 ABCB11O95342 1321 aa13.04□□□□□ -0.32
SMAD4-211ENST00000590499 LOC102724159A0A0B4J2E5 919 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 WIPF1O43516 503 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 PPP1R11O60927 126 aaPredicted RBP13.03□□□□□ -0.32
SMAD4-211ENST00000590499 ALDH5A1P51649 535 aaPredicted RBP13.03□□□□□ -0.32
SMAD4-211ENST00000590499 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
SMAD4-211ENST00000590499 PWP2Q15269 919 aaKnown RBP13.03□□□□□ -0.32
SMAD4-211ENST00000590499 ADCK5Q3MIX3 580 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
SMAD4-211ENST00000590499 RNF207Q6ZRF8 634 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 ZNF654Q8IZM8 581 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 VAT1LQ9HCJ6 419 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
SMAD4-211ENST00000590499 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 OPLAHO14841 1288 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 ZBTB5O15062 677 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 AXIN1O15169 862 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 DHX16O60231 1041 aaKnown RBP13.02□□□□□ -0.33
SMAD4-211ENST00000590499 DUSP11O75319 330 aaKnown RBP13.02□□□□□ -0.33
SMAD4-211ENST00000590499 PGK1P00558 417 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 EDNRBP24530 442 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 HSPA4P34932 840 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 EXOSC10Q01780 885 aaKnown RBP13.02□□□□□ -0.33
SMAD4-211ENST00000590499 GHRHRQ02643 423 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 LRRC26Q2I0M4 334 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 SGMS1Q86VZ5 419 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 FBXO11Q86XK2 927 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 NEK1Q96PY6 1258 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 SPSB2Q99619 263 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 MYL10Q9BUA6 226 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 LRRC2Q9BYS8 371 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
SMAD4-211ENST00000590499 ADD3Q9UEY8 706 aaKnown RBP13.02□□□□□ -0.33
SMAD4-211ENST00000590499 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
SMAD4-211ENST00000590499 KBTBD13C9JR72 458 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 CALML3P27482 149 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 NKX3-2P78367 333 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 SNX17Q15036 470 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 CCSAPQ6IQ19 270 aaPredicted RBP13.01□□□□□ -0.33
SMAD4-211ENST00000590499 TAPT1Q6NXT6 567 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
SMAD4-211ENST00000590499 KLHDC9Q8NEP7 349 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 DNERQ8NFT8 737 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 TBC1D5Q92609 795 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 PIGSQ96S52 555 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 SENP6Q9GZR1 1112 aaPredicted RBP13.01□□□□□ -0.33
SMAD4-211ENST00000590499 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
SMAD4-211ENST00000590499 PHF24Q9UPV7 400 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms