RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CCDC197Q8NCU1 140 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 MGARPQ8TDB4 240 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 EZH1Q92800 747 aaPredicted RBP16.71■□□□□ 0.27
CIRBP-228ENST00000590347 HPS3Q969F9 1004 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 DPH5Q9H2P9 285 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 ECEL1O95672 775 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 NEFHP12036 1026 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 ERVK-9P63128 1117 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 TAX1BP1Q86VP1 789 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 SH2D4AQ9H788 454 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 H0Y3Z8 333 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 USO1O60763 962 aaKnown RBP16.7■□□□□ 0.26
CIRBP-228ENST00000590347 LRRC34Q8IZ02 419 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 MAGEC3Q8TD91 643 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-228ENST00000590347 NDST4Q9H3R1 872 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 BATF3Q9NR55 127 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 ARHGAP20Q9P2F6 1191 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 LGALS16A8MUM7 142 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 KRT16P08779 473 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 SLC1A4P43007 532 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 KIF11P52732 1056 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 TRIM14Q14142 442 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 GSDMAQ96QA5 445 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 ZFATQ9P243 1243 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 USP54Q70EL1 1684 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 TRIM75PA6NK02 468 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 MAGEA1P43355 309 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
CIRBP-228ENST00000590347 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 RNF220Q5VTB9 566 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 LPIN2Q92539 896 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 MMRN2Q9H8L6 949 aa16.7■□□□□ 0.26
CIRBP-228ENST00000590347 PP2D1A8MPX8 630 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 DNAJC8O75937 253 aaPredicted RBP16.69■□□□□ 0.26
CIRBP-228ENST00000590347 TDRD12Q587J7 1177 aaKnown RBP16.69■□□□□ 0.26
CIRBP-228ENST00000590347 LRP10Q7Z4F1 713 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 CCDC155Q8N6L0 562 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 TUBGCP2Q9BSJ2 902 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.69■□□□□ 0.264e-13■□□□□ 8.8
CIRBP-228ENST00000590347 LRRC14Q15048 493 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 CCDC38Q502W7 563 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 TEKT4Q8WW24 435 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 SHISA4Q96DD7 197 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 GDF3Q9NR23 364 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
CIRBP-228ENST00000590347 RWDD2AQ9UIY3 292 aa16.69■□□□□ 0.26
CIRBP-228ENST00000590347 SOS2Q07890 1332 aaPredicted RBP16.69■□□□□ 0.26
CIRBP-228ENST00000590347 LRRC10BA6NIK2 292 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 IDH1O75874 414 aaKnown RBP16.68■□□□□ 0.26
CIRBP-228ENST00000590347 PCK1P35558 622 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 SLCO1A2P46721 670 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 CFAP221Q4G0U5 840 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 ADAT2Q7Z6V5 191 aaKnown RBP16.68■□□□□ 0.26
CIRBP-228ENST00000590347 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 ALS2CR12Q96Q35 445 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 GOPCQ9HD26 462 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 CORO1CQ9ULV4 474 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-228ENST00000590347 CEP131Q9UPN4 1083 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 C2CD2Q9Y426 696 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 TCP1P17987 556 aaKnown RBP16.68■□□□□ 0.26
CIRBP-228ENST00000590347 MCM7P33993 719 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 KLHDC7AQ5VTJ3 777 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 MIGA2Q7L4E1 593 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 RRAGAQ7L523 313 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 CHMP6Q96FZ7 201 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 DDX47Q9H0S4 455 aaKnown RBP16.68■□□□□ 0.26
CIRBP-228ENST00000590347 ERICH2A1L162 156 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 PALMO75781 387 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 RTN3O95197 1032 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-228ENST00000590347 CHN1P15882 459 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 SPAG1Q07617 926 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 PTGDRQ13258 359 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 BLMHQ13867 455 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 CWF19L1Q69YN2 538 aaKnown RBP16.68■□□□□ 0.26
CIRBP-228ENST00000590347 ATG9AQ7Z3C6 839 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 ECT2Q9H8V3 914 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 NLRC4Q9NPP4 1024 aa16.68■□□□□ 0.26
CIRBP-228ENST00000590347 PCDH11XQ9BZA7 1347 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 PCDH11YQ9BZA8 1340 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 RPN1P04843 607 aaKnown RBP16.67■□□□□ 0.26
CIRBP-228ENST00000590347 MMEP08473 750 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 CNGA1P29973 690 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 DHX9Q08211 1270 aaKnown RBP16.67■□□□□ 0.26
CIRBP-228ENST00000590347 LACTB2Q53H82 288 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-228ENST00000590347 UBAP2Q5T6F2 1119 aaKnown RBP16.67■□□□□ 0.26
CIRBP-228ENST00000590347 PPP1R12CQ9BZL4 782 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 LY9Q9HBG7 655 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 NKX1-2Q9UD57 310 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-228ENST00000590347 LMO7Q8WWI1 1683 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 ALS2Q96Q42 1657 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 FOXO6A8MYZ6 492 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 SMIM22K7EJ46 135 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms