RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
APOC1-206ENST00000590334 PIK3AP1Q6ZUJ8 805 aa13.75□□□□□ -0.21
APOC1-206ENST00000590334 BRAPQ7Z569 592 aa13.75□□□□□ -0.21
APOC1-206ENST00000590334 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.75□□□□□ -0.21
APOC1-206ENST00000590334 NRBP1Q9UHY1 535 aa13.75□□□□□ -0.21
APOC1-206ENST00000590334 CYP3A7-CYP3A51PA0A087WV96 503 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 FAM205CA6NFA0 338 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 HMGCRP04035 888 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 ZSCAN22P10073 491 aaPredicted RBP13.74□□□□□ -0.21
APOC1-206ENST00000590334 ELNP15502 786 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 CYP3A7P24462 503 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 GRK4P32298 578 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 UBXN2AP68543 259 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 RESTQ13127 1097 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
APOC1-206ENST00000590334 PKP1Q13835 747 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 INF2Q27J81 1249 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 MAP3K21Q5TCX8 1036 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 MFSD14CQ5VZR4 134 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 MOXD1Q6UVY6 613 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 NIPA1Q7RTP0 329 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
APOC1-206ENST00000590334 ABHD16BQ9H3Z7 469 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 ZSCAN16Q9H4T2 348 aaPredicted RBP13.74□□□□□ -0.21
APOC1-206ENST00000590334 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 UBIAD1Q9Y5Z9 338 aa13.74□□□□□ -0.21
APOC1-206ENST00000590334 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
APOC1-206ENST00000590334 RBM47A0AV96 593 aaKnown RBP13.73□□□□□ -0.21
APOC1-206ENST00000590334 RGS20O76081 388 aa13.73□□□□□ -0.21
APOC1-206ENST00000590334 BRD1O95696 1058 aa13.73□□□□□ -0.21
APOC1-206ENST00000590334 MYCLP12524 364 aaPredicted RBP13.73□□□□□ -0.21
APOC1-206ENST00000590334 CYP2C19P33261 490 aa13.73□□□□□ -0.21
APOC1-206ENST00000590334 TRAPPC10P48553 1259 aa13.73□□□□□ -0.21
APOC1-206ENST00000590334 PPP4R3AQ6IN85 833 aa13.73□□□□□ -0.21
APOC1-206ENST00000590334 TAPT1Q6NXT6 567 aa13.73□□□□□ -0.21
APOC1-206ENST00000590334 MBOAT7Q96N66 472 aa13.73□□□□□ -0.21
APOC1-206ENST00000590334 NAP1L4Q99733 375 aaKnown RBP13.73□□□□□ -0.21
APOC1-206ENST00000590334 ZDHHC9Q9Y397 364 aa13.73□□□□□ -0.21
APOC1-206ENST00000590334 WDR81Q562E7 1941 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 IGLV3-22A0A075B6J6 115 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 FAM86B1E9PN63 330 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 MEIS1O00470 390 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 FAM86B2P0C5J1 330 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 ZNF865P0CJ78 1059 aaPredicted RBP13.72□□□□□ -0.21
APOC1-206ENST00000590334 CYBAP13498 195 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
APOC1-206ENST00000590334 ITGB5P18084 799 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 ICAM3P32942 547 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 TOB1P50616 345 aaPredicted RBP13.72□□□□□ -0.21
APOC1-206ENST00000590334 CACNB2Q08289 660 aaPredicted RBP13.72□□□□□ -0.21
APOC1-206ENST00000590334 ORC2Q13416 577 aaPredicted RBP13.72□□□□□ -0.21
APOC1-206ENST00000590334 ACVR2BQ13705 512 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 GPRASP2Q96D09 838 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 MXRA8Q9BRK3 442 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 JADE2Q9NQC1 790 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
APOC1-206ENST00000590334 CNPY2Q9Y2B0 182 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 TCHHQ07283 1943 aa13.72□□□□□ -0.21
APOC1-206ENST00000590334 SPATA31C2B4DYI2 1134 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 MAFGO15525 162 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 F13A1P00488 732 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 INHAP05111 366 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 TGFB3P10600 412 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 NUCB2P80303 420 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 TRIM32Q13049 653 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 SLC9C1Q4G0N8 1177 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 Q4G0T1 1027 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 KCNV1Q6PIU1 500 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 FERMT3Q86UX7 667 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 FBXO16Q8IX29 292 aaPredicted RBP13.71□□□□□ -0.21
APOC1-206ENST00000590334 TRPV1Q8NER1 839 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 CYP2W1Q8TAV3 490 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 LENG9Q96B70 501 aa13.71□□□□□ -0.21
APOC1-206ENST00000590334 NOL7Q9UMY1 257 aaKnown RBP13.71□□□□□ -0.21
APOC1-206ENST00000590334 WNT7AO00755 349 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 FIBPO43427 364 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 TDP2O95551 362 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
APOC1-206ENST00000590334 ZNF76P36508 570 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 SETQ01105 290 aaPredicted RBP13.7□□□□□ -0.22
APOC1-206ENST00000590334 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 MTMR1Q13613 665 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 LETM2Q2VYF4 491 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 GNPTABQ3T906 1256 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 PRAMEF19Q5SWL8 479 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 IQSEC1Q6DN90 963 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 CCDC62Q6P9F0 684 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 NLRX1Q86UT6 975 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 SH3TC2Q8TF17 1288 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 SCFD2Q8WU76 684 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
APOC1-206ENST00000590334 CDHR1Q96JP9 859 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 WDR11Q9BZH6 1224 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
APOC1-206ENST00000590334 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms