RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ERVK-24P63145 666 aa19.71■□□□□ 0.75
CXXC1-212ENST00000589940 PCNX4Q63HM2 1172 aa19.71■□□□□ 0.75
CXXC1-212ENST00000589940 CYP2W1Q8TAV3 490 aa19.71■□□□□ 0.75
CXXC1-212ENST00000589940 ETNPPLQ8TBG4 499 aa19.71■□□□□ 0.75
CXXC1-212ENST00000589940 RAB34Q9BZG1 259 aa19.71■□□□□ 0.75
CXXC1-212ENST00000589940 TTC12Q9H892 705 aaPredicted RBP19.71■□□□□ 0.75
CXXC1-212ENST00000589940 TMEM88BA6NKF7 163 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 POLR2DO15514 142 aaKnown RBP19.7■□□□□ 0.74
CXXC1-212ENST00000589940 ERCC3P19447 782 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 PDIA5Q14554 519 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 Q3C1V9 767 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 RBM43Q6ZSC3 357 aaKnown RBP19.7■□□□□ 0.74
CXXC1-212ENST00000589940 ANKRD35Q8N283 1001 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 IL31RAQ8NI17 732 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 PARK7Q99497 189 aaKnown RBP19.7■□□□□ 0.74
CXXC1-212ENST00000589940 SDF4Q9BRK5 362 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 ABT1Q9ULW3 272 aaKnown RBP19.7■□□□□ 0.74
CXXC1-212ENST00000589940 EIF2AK2P19525 551 aaKnown RBP19.7■□□□□ 0.74
CXXC1-212ENST00000589940 GCLCP48506 637 aaPredicted RBP19.7■□□□□ 0.74
CXXC1-212ENST00000589940 GSE1Q14687 1217 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 PGM5Q15124 567 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 ARHGEF16Q5VV41 709 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 PDILTQ8N807 584 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 FAM20AQ96MK3 541 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 PURBQ96QR8 312 aaKnown RBP19.7■□□□□ 0.74
CXXC1-212ENST00000589940 PDCD2LQ9BRP1 358 aa19.7■□□□□ 0.74
CXXC1-212ENST00000589940 CDC25AP30304 524 aa19.69■□□□□ 0.74
CXXC1-212ENST00000589940 UBA7P41226 1012 aa19.69■□□□□ 0.74
CXXC1-212ENST00000589940 SETQ01105 290 aaPredicted RBP19.69■□□□□ 0.74
CXXC1-212ENST00000589940 LONRF3Q496Y0 759 aa19.69■□□□□ 0.74
CXXC1-212ENST00000589940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.69■□□□□ 0.74
CXXC1-212ENST00000589940 PYM1Q9BRP8 204 aaKnown RBP19.69■□□□□ 0.74
CXXC1-212ENST00000589940 PANK2Q9BZ23 570 aa19.69■□□□□ 0.74
CXXC1-212ENST00000589940 PCDHA12Q9UN75 941 aa19.69■□□□□ 0.74
CXXC1-212ENST00000589940 A0A087X0B3 334 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 PP2D1A8MPX8 630 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 MEIS1O00470 390 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 MSH4O15457 936 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 XRRA1Q6P2D8 792 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 KRBA2Q6ZNG9 492 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 PLA2G4DQ86XP0 818 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 GPRC5AQ8NFJ5 357 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 NSUN6Q8TEA1 469 aaKnown RBP19.68■□□□□ 0.74
CXXC1-212ENST00000589940 GJA10Q969M2 543 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 CCDC102AQ96A19 550 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 HHIPL1Q96JK4 782 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 MXRA8Q9BRK3 442 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 CCSER1Q9C0I3 900 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 LRWD1Q9UFC0 647 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 FSTL1Q12841 308 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 LRSAM1Q6UWE0 723 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 CNNM3Q8NE01 707 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 SHCBP1Q8NEM2 672 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 MROH8Q9H579 483 aa19.68■□□□□ 0.74
CXXC1-212ENST00000589940 ZCCHC17Q9NP64 241 aaKnown RBP19.68■□□□□ 0.74
CXXC1-212ENST00000589940 FAM155AB1AL88 458 aaPredicted RBP19.67■□□□□ 0.74
CXXC1-212ENST00000589940 MRPS9P82933 396 aaKnown RBP19.67■□□□□ 0.74
CXXC1-212ENST00000589940 NIPA1Q7RTP0 329 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 CKAP2LQ8IYA6 745 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 POTEMA6NI47 508 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 BCRP11274 1271 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 ITGB5P18084 799 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 CCNA1P78396 465 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 ELOA2Q8IYF1 753 aaPredicted RBP19.67■□□□□ 0.74
CXXC1-212ENST00000589940 ANKRD13CQ8N6S4 541 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 DHX58Q96C10 678 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 MORF4L1Q9UBU8 362 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 USP25Q9UHP3 1055 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 UBIAD1Q9Y5Z9 338 aa19.67■□□□□ 0.74
CXXC1-212ENST00000589940 ACTN4O43707 911 aaKnown RBP19.66■□□□□ 0.74
CXXC1-212ENST00000589940 INHBEP58166 350 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 CABP7Q86V35 215 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 IQUBQ8NA54 791 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 DNERQ8NFT8 737 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 ZFP91Q96JP5 570 aaPredicted RBP19.66■□□□□ 0.74
CXXC1-212ENST00000589940 UIMC1Q96RL1 719 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 R3HDMLQ9H3Y0 253 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 DISC1Q9NRI5 854 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 SERTAD1Q9UHV2 236 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 IGF2BP3O00425 579 aaKnown RBP eCLIP19.66■□□□□ 0.74
CXXC1-212ENST00000589940 NR3C2P08235 984 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 MYCLP12524 364 aaPredicted RBP19.66■□□□□ 0.74
CXXC1-212ENST00000589940 CCND2P30279 289 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 KARSQ15046 597 aaKnown RBP19.66■□□□□ 0.74
CXXC1-212ENST00000589940 E2F4Q16254 413 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 VSIG10LQ86VR7 867 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 CCDC39Q9UFE4 941 aa19.66■□□□□ 0.74
CXXC1-212ENST00000589940 SLFN14P0C7P3 912 aa19.65■□□□□ 0.74
CXXC1-212ENST00000589940 KANK3Q6NY19 840 aa19.65■□□□□ 0.74
CXXC1-212ENST00000589940 RASSF8Q8NHQ8 419 aa19.65■□□□□ 0.74
CXXC1-212ENST00000589940 SLC5A5Q92911 643 aa19.65■□□□□ 0.74
CXXC1-212ENST00000589940 MMTAG2Q9BU76 263 aaKnown RBP19.65■□□□□ 0.74
CXXC1-212ENST00000589940 JADE2Q9NQC1 790 aa19.65■□□□□ 0.74
CXXC1-212ENST00000589940 POTEB2H3BUK9 544 aa19.64■□□□□ 0.74
CXXC1-212ENST00000589940 ARP10275 920 aa19.64■□□□□ 0.74
CXXC1-212ENST00000589940 YY1P25490 414 aa19.64■□□□□ 0.74
CXXC1-212ENST00000589940 CNTN2Q02246 1040 aa19.64■□□□□ 0.74
CXXC1-212ENST00000589940 SPIRE1Q08AE8 756 aa19.64■□□□□ 0.74
CXXC1-212ENST00000589940 KCTD2Q14681 263 aa19.64■□□□□ 0.74
CXXC1-212ENST00000589940 CCDC34Q96HJ3 373 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms