RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-205	ENST00000589532	STOX1	Q6ZVD7	989 aa		27.65	■■■□□ 2.02
LSM7-205	ENST00000589532	SESTD1	Q86VW0	696 aa		27.65	■■■□□ 2.02
LSM7-205	ENST00000589532	DDX41	Q9UJV9	622 aa	Known RBP	27.65	■■■□□ 2.02
LSM7-205	ENST00000589532	TET1	Q8NFU7	2136 aa		27.65	■■■□□ 2.02
LSM7-205	ENST00000589532	XIRP2	A4UGR9	3374 aa		27.65	■■■□□ 2.02
LSM7-205	ENST00000589532	SGSM2	O43147	1006 aa		27.64	■■■□□ 2.02
LSM7-205	ENST00000589532	RGS20	O76081	388 aa		27.64	■■■□□ 2.02
LSM7-205	ENST00000589532	NKX2-4	Q9H2Z4	354 aa		27.64	■■■□□ 2.02
LSM7-205	ENST00000589532	PRDM12	Q9H4Q4	367 aa		27.64	■■■□□ 2.02
LSM7-205	ENST00000589532	RIOX1	Q9H6W3	641 aa		27.64	■■■□□ 2.02
LSM7-205	ENST00000589532	MYO9B	Q13459	2157 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	PTPRS	Q13332	1948 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	CFB	P00751	764 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	NR3C2	P08235	984 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	TROAP	Q12815	778 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	ADGRE1	Q14246	886 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	ARHGEF16	Q5VV41	709 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	PDCD2L	Q9BRP1	358 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	MSRA	Q9UJ68	235 aa		27.63	■■■□□ 2.01
LSM7-205	ENST00000589532		U3KPZ7	1027 aa	Predicted RBP	27.63	■■■□□ 2.01
LSM7-205	ENST00000589532	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.62	■■■□□ 2.01
LSM7-205	ENST00000589532	CYTH3	O43739	400 aa		27.62	■■■□□ 2.01
LSM7-205	ENST00000589532	EIF3J	O75822	258 aa	Known RBP	27.62	■■■□□ 2.01
LSM7-205	ENST00000589532	RFC2	P35250	354 aa		27.62	■■■□□ 2.01
LSM7-205	ENST00000589532	ANTXR2	P58335	489 aa		27.62	■■■□□ 2.01
LSM7-205	ENST00000589532	RUFY2	Q8WXA3	655 aa		27.62	■■■□□ 2.01
LSM7-205	ENST00000589532	MAP3K20	Q9NYL2	800 aa	Known RBP	27.62	■■■□□ 2.01
LSM7-205	ENST00000589532	SLC4A7	Q9Y6M7	1214 aa		27.62	■■■□□ 2.01
LSM7-205	ENST00000589532		E7EWF7	191 aa		27.61	■■■□□ 2.01
LSM7-205	ENST00000589532	IQCF3	P0C7M6	154 aa		27.61	■■■□□ 2.01
LSM7-205	ENST00000589532	HOXD8	P13378	290 aa	Predicted RBP	27.61	■■■□□ 2.01
LSM7-205	ENST00000589532	TRDN	Q13061	729 aa		27.61	■■■□□ 2.01
LSM7-205	ENST00000589532	IL31RA	Q8NI17	732 aa		27.61	■■■□□ 2.01
LSM7-205	ENST00000589532	PCDHA1	Q9Y5I3	950 aa		27.61	■■■□□ 2.01
LSM7-205	ENST00000589532	RABGGTB	P53611	331 aa		27.6	■■■□□ 2.01
LSM7-205	ENST00000589532	RBL2	Q08999	1139 aa		27.6	■■■□□ 2.01
LSM7-205	ENST00000589532	GDF6	Q6KF10	455 aa	Predicted RBP	27.6	■■■□□ 2.01
LSM7-205	ENST00000589532	DEFB128	Q7Z7B8	93 aa		27.6	■■■□□ 2.01
LSM7-205	ENST00000589532	MB21D2	Q8IYB1	491 aa	Predicted RBP	27.6	■■■□□ 2.01
LSM7-205	ENST00000589532	PIGS	Q96S52	555 aa		27.6	■■■□□ 2.01
LSM7-205	ENST00000589532	PCDHA11	Q9Y5I1	949 aa		27.6	■■■□□ 2.01
LSM7-205	ENST00000589532	TRIP12	Q14669	1992 aa	Predicted RBP	27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	F2	P00734	622 aa		27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	SAMD3	Q8N6K7	520 aa		27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	PPTC7	Q8NI37	304 aa		27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	DHX38	Q92620	1227 aa	Known RBP	27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	MAP4K1	Q92918	833 aa		27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	GAS2L1	Q99501	681 aa	Predicted RBP	27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	MRVI1	Q9Y6F6	885 aa		27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	MYH7B	A7E2Y1	1941 aa		27.59	■■■□□ 2.01
LSM7-205	ENST00000589532	HAS3	O00219	553 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	IFIT3	O14879	490 aa	Known RBP	27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	MYOG	P15173	224 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	ATP2A2	P16615	1042 aa	Known RBP	27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	HOXA13	P31271	388 aa	Predicted RBP	27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	GPNMB	Q14956	572 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	PGM5	Q15124	567 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	PTGIS	Q16647	500 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	CHST3	Q7LGC8	479 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	VSIG10L	Q86VR7	867 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	HOMER1	Q86YM7	354 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	NCOA7	Q8NI08	942 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	SLC28A3	Q9HAS3	691 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	FRMPD4	Q14CM0	1322 aa		27.58	■■■□□ 2.01
LSM7-205	ENST00000589532	ZBBX	A8MT70	800 aa		27.57	■■■□□ 2
LSM7-205	ENST00000589532	BFSP2	Q13515	415 aa		27.57	■■■□□ 2
LSM7-205	ENST00000589532	WTAP	Q15007	396 aa		27.57	■■■□□ 2
LSM7-205	ENST00000589532	DGKD	Q16760	1214 aa		27.57	■■■□□ 2
LSM7-205	ENST00000589532	BMP2KL	Q5H9B9	411 aa		27.57	■■■□□ 2
LSM7-205	ENST00000589532	RALYL	Q86SE5	291 aa	Known RBP	27.57	■■■□□ 2
LSM7-205	ENST00000589532	CAGE1	Q8TC20	777 aa		27.57	■■■□□ 2
LSM7-205	ENST00000589532	GTF2IRD1	Q9UHL9	959 aa		27.57	■■■□□ 2
LSM7-205	ENST00000589532	CAST	P20810	708 aa	Known RBP	27.56	■■■□□ 2
LSM7-205	ENST00000589532	LAMC2	Q13753	1193 aa		27.56	■■■□□ 2
LSM7-205	ENST00000589532	IGDCC4	Q8TDY8	1250 aa		27.56	■■■□□ 2
LSM7-205	ENST00000589532	AFAP1L1	Q8TED9	768 aa		27.56	■■■□□ 2
LSM7-205	ENST00000589532	PRDM6	Q9NQX0	595 aa		27.56	■■■□□ 2
LSM7-205	ENST00000589532	ZNF286B	P0CG31	522 aa		27.55	■■■□□ 2
LSM7-205	ENST00000589532	MYSM1	Q5VVJ2	828 aa		27.55	■■■□□ 2
LSM7-205	ENST00000589532	PPP2R2D	Q66LE6	453 aa		27.55	■■■□□ 2
LSM7-205	ENST00000589532	SLC9A7	Q96T83	725 aa		27.55	■■■□□ 2
LSM7-205	ENST00000589532	NOD1	Q9Y239	953 aa		27.55	■■■□□ 2
LSM7-205	ENST00000589532	PNMA6F	A0A0J9YX94	578 aa		27.54	■■■□□ 2
LSM7-205	ENST00000589532	ACTN1	P12814	892 aa		27.54	■■■□□ 2
LSM7-205	ENST00000589532	UBA1	P22314	1058 aa	Known RBP	27.54	■■■□□ 2
LSM7-205	ENST00000589532	PSEN2	P49810	448 aa		27.54	■■■□□ 2
LSM7-205	ENST00000589532	RETREG2	Q8NC44	543 aa		27.54	■■■□□ 2
LSM7-205	ENST00000589532	RBM8A	Q9Y5S9	174 aa	Known RBP	27.54	■■■□□ 2
LSM7-205	ENST00000589532	BDP1	A6H8Y1	2624 aa		27.54	■■■□□ 2
LSM7-205	ENST00000589532	ERICH2	A1L162	156 aa		27.53	■■■□□ 2
LSM7-205	ENST00000589532	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.53	■■■□□ 2
LSM7-205	ENST00000589532	POLR2M	P0CAP2	368 aa		27.53	■■■□□ 2
LSM7-205	ENST00000589532	MYCL	P12524	364 aa	Predicted RBP	27.53	■■■□□ 2
LSM7-205	ENST00000589532	CHMP4BP1	P59074	171 aa		27.53	■■■□□ 2
LSM7-205	ENST00000589532	SP2	Q02086	613 aa		27.53	■■■□□ 2
LSM7-205	ENST00000589532	COL9A3	Q14050	684 aa	Predicted RBP	27.53	■■■□□ 2
LSM7-205	ENST00000589532	HSDL1	Q3SXM5	330 aa		27.53	■■■□□ 2
LSM7-205	ENST00000589532	TMEM67	Q5HYA8	995 aa		27.53	■■■□□ 2
LSM7-205	ENST00000589532	CELF3	Q5SZQ8	465 aa	Known RBP	27.53	■■■□□ 2
LSM7-205	ENST00000589532	TRAF7	Q6Q0C0	670 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms