RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 GORASP1Q9BQQ3 440 aa5.4□□□□□ -1.54
SMAD4-207ENST00000589076 YIPF4Q9BSR8 244 aa5.4□□□□□ -1.54
SMAD4-207ENST00000589076 MTA3Q9BTC8 594 aa5.4□□□□□ -1.54
SMAD4-207ENST00000589076 CBFA2T2O43439 604 aa5.39□□□□□ -1.55
SMAD4-207ENST00000589076 CYP1A1P04798 512 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-207ENST00000589076 ATP2B1P20020 1258 aa5.39□□□□□ -1.55
SMAD4-207ENST00000589076 TACR2P21452 398 aa5.39□□□□□ -1.55
SMAD4-207ENST00000589076 DNAJA1P31689 397 aaKnown RBP5.39□□□□□ -1.55
SMAD4-207ENST00000589076 PRAMEF18Q5VWM3 479 aa5.39□□□□□ -1.55
SMAD4-207ENST00000589076 SH3RF3Q8TEJ3 882 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-207ENST00000589076 SEC14L1Q92503 715 aa5.39□□□□□ -1.55
SMAD4-207ENST00000589076 TANGO6Q9C0B7 1094 aa5.39□□□□□ -1.55
SMAD4-207ENST00000589076 PPT2Q9UMR5 302 aa5.39□□□□□ -1.55
SMAD4-207ENST00000589076 C7orf72A4D263 438 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 NPEPPSL1A6NEC2 478 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 C9orf118A6NHY6 69 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 CYR61O00622 381 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 LAMTOR5O43504 91 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 IGSF3O75054 1194 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 FZD7O75084 574 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 CYP7B1O75881 506 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 C8BP07358 591 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 POMZP3Q6PJE2 187 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 RUFY4Q6ZNE9 571 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 TXNDC5Q8NBS9 432 aaKnown RBP5.38□□□□□ -1.55
SMAD4-207ENST00000589076 RCC1LQ96I51 464 aaKnown RBP5.38□□□□□ -1.55
SMAD4-207ENST00000589076 KLHL25Q9H0H3 589 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 CGGBP1Q9UFW8 167 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-207ENST00000589076 ST6GALNAC2Q9UJ37 374 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 TSC22D4Q9Y3Q8 395 aa5.38□□□□□ -1.55
SMAD4-207ENST00000589076 DDX3XO00571 662 aaKnown RBP eCLIP5.37□□□□□ -1.552e-13■□□□□ 10.8
SMAD4-207ENST00000589076 NAT2P11245 290 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 ARHGEF39Q8N4T4 335 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 OR6P1Q8NGX9 317 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 UBXN4Q92575 508 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 ARMC5Q96C12 935 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 FGD4Q96M96 766 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMAD4-207ENST00000589076 MCMBPQ9BTE3 642 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 MRIQ9BWK5 157 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 DEF6Q9H4E7 631 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 JADE2Q9NQC1 790 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 MARCH2Q9P0N8 246 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 PPP1R1BQ9UD71 204 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-207ENST00000589076 SIT1Q9Y3P8 196 aa5.37□□□□□ -1.55
SMAD4-207ENST00000589076 PPP1R11O60927 126 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-207ENST00000589076 EPHX1P07099 455 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 SOX9P48436 509 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 EIF6P56537 245 aaKnown RBP5.36□□□□□ -1.55
SMAD4-207ENST00000589076 NKX3-2P78367 333 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 LIMS2Q7Z4I7 341 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 L2HGDHQ9H9P8 463 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 GINM1Q9NU53 330 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 BTG4Q9NY30 223 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 AKT3Q9Y243 479 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 EFR3BQ9Y2G0 817 aa5.36□□□□□ -1.55
SMAD4-207ENST00000589076 LTBP3Q9NS15 1303 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 C22orf46C9J442 243 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 NOP56O00567 594 aaKnown RBP5.35□□□□□ -1.55
SMAD4-207ENST00000589076 FGRP09769 529 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-207ENST00000589076 IQCEQ6IPM2 695 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 SPRED1Q7Z699 444 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 CIR1Q86X95 450 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-207ENST00000589076 MCF2L2Q86YR7 1114 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 MIB1Q86YT6 1006 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 C19orf47Q8N9M1 422 aaKnown RBP5.35□□□□□ -1.55
SMAD4-207ENST00000589076 MMP19Q99542 508 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 CLEC1BQ9P126 229 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 STRIP2Q9ULQ0 834 aa5.35□□□□□ -1.55
SMAD4-207ENST00000589076 ANKRD34BA5PLL1 514 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 MYO1BO43795 1136 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 SSBP05455 408 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMAD4-207ENST00000589076 THBDP07204 575 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 PLS3P13797 630 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 GTF2F1P35269 517 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMAD4-207ENST00000589076 SLC6A11P48066 632 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 ITGA1P56199 1179 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 CHRNA2Q15822 529 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 MROH9Q5TGP6 573 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 ARHGEF18Q6ZSZ5 1173 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 FAM126BQ8IXS8 530 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 PLEKHO2Q8TD55 490 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 CLIC6Q96NY7 704 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 WRNIP1Q96S55 665 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 KLC2Q9H0B6 622 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 VPS11Q9H270 941 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 SEMA4AQ9H3S1 761 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 COA3Q9Y2R0 106 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-207ENST00000589076 TCAF1Q9Y4C2 921 aa5.34□□□□□ -1.55
SMAD4-207ENST00000589076 OVOL3O00110 214 aa5.33□□□□□ -1.56
SMAD4-207ENST00000589076 STK10O94804 968 aaKnown RBP5.33□□□□□ -1.56
SMAD4-207ENST00000589076 GTF2A2P52657 109 aa5.33□□□□□ -1.56
SMAD4-207ENST00000589076 RPL11P62913 178 aaKnown RBP5.33□□□□□ -1.56
SMAD4-207ENST00000589076 RBL2Q08999 1139 aa5.33□□□□□ -1.56
SMAD4-207ENST00000589076 PPP2R5EQ16537 467 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms