RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 PTPRSQ13332 1948 aa17.05■□□□□ 0.32
KDM4B-204ENST00000588166 SH2B2O14492 632 aaPredicted RBP17.04■□□□□ 0.32
KDM4B-204ENST00000588166 SUPT20HL2P0C7V6 817 aa17.04■□□□□ 0.32
KDM4B-204ENST00000588166 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
KDM4B-204ENST00000588166 EDNRBP24530 442 aa17.04■□□□□ 0.32
KDM4B-204ENST00000588166 LIFRP42702 1097 aa17.04■□□□□ 0.32
KDM4B-204ENST00000588166 TFF2Q03403 129 aa17.04■□□□□ 0.32
KDM4B-204ENST00000588166 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
KDM4B-204ENST00000588166 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
KDM4B-204ENST00000588166 NECAB3Q96P71 396 aaPredicted RBP17.04■□□□□ 0.32
KDM4B-204ENST00000588166 LY9Q9HBG7 655 aa17.04■□□□□ 0.32
KDM4B-204ENST00000588166 BRWD1Q9NSI6 2320 aa17.04■□□□□ 0.32
KDM4B-204ENST00000588166 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
KDM4B-204ENST00000588166 EPOPA6NHQ4 379 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 ZBBXA8MT70 800 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
KDM4B-204ENST00000588166 DDAH1O94760 285 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 ARHGEF15O94989 841 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 CA3P07451 260 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 PSMA5P28066 241 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 CPT1AP50416 773 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 GRM4Q14833 912 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 ZNF654Q8IZM8 581 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 MTG1Q9BT17 334 aaPredicted RBP17.03■□□□□ 0.32
KDM4B-204ENST00000588166 USP26Q9BXU7 913 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 SNX14Q9Y5W7 946 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 MTCH2Q9Y6C9 303 aa17.03■□□□□ 0.32
KDM4B-204ENST00000588166 BAZ2BQ9UIF8 2168 aaKnown RBP17.03■□□□□ 0.32
KDM4B-204ENST00000588166 A6NJR5 290 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 RFXAPO00287 272 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 MYL3P08590 195 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 TROAPQ12815 778 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 ADCK5Q3MIX3 580 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 NFRKBQ6P4R8 1299 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 BLOC1S2Q6QNY1 142 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 DEFB128Q7Z7B8 93 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 OR6J1Q8NGC5 347 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 PPP1R13LQ8WUF5 828 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 JAKMIP1Q96N16 626 aaKnown RBP17.02■□□□□ 0.32
KDM4B-204ENST00000588166 SENP2Q9HC62 589 aa17.02■□□□□ 0.32
KDM4B-204ENST00000588166 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
KDM4B-204ENST00000588166 KLRF2D3W0D1 207 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 IQCF3P0C7M6 154 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 CALM1P0DP23 149 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 CALM2P0DP24 149 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 CALM3P0DP25 149 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 KIF5BP33176 963 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 RFC2P35250 354 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
KDM4B-204ENST00000588166 SYNE3Q6ZMZ3 975 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 SGMS1Q86VZ5 419 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 CTCFLQ8NI51 663 aaPredicted RBP17.01■□□□□ 0.31
KDM4B-204ENST00000588166 COPS5Q92905 334 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 MAP3K14Q99558 947 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 UBA5Q9GZZ9 404 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 MAD2L2Q9UI95 211 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
KDM4B-204ENST00000588166 NKRFO15226 690 aaKnown RBP eCLIP17■□□□□ 0.31
KDM4B-204ENST00000588166 ARIH2O95376 493 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 CALML3P27482 149 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 KCNQ1P51787 676 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 FGD1P98174 961 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 EXOSC10Q01780 885 aaKnown RBP17■□□□□ 0.31
KDM4B-204ENST00000588166 TAP1Q03518 808 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
KDM4B-204ENST00000588166 KRT40Q6A162 431 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 RNF207Q6ZRF8 634 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 ADGRF4Q8IZF3 695 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 STAG2Q8N3U4 1231 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 PHOSPHO2Q8TCD6 241 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 CTAGE1Q96RT6 745 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 SLC9A7Q96T83 725 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
KDM4B-204ENST00000588166 TSPYL2Q9H2G4 693 aaPredicted RBP17■□□□□ 0.31
KDM4B-204ENST00000588166 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
KDM4B-204ENST00000588166 COL4A4P53420 1690 aaPredicted RBP17■□□□□ 0.31
KDM4B-204ENST00000588166 GNAQP50148 359 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 PTPN11Q06124 597 aaPredicted RBP16.99■□□□□ 0.31
KDM4B-204ENST00000588166 GPNMBQ14956 572 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 PPP2R5BQ15173 497 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 DNERQ8NFT8 737 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 SCFD2Q8WU76 684 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 LZTS2Q9BRK4 669 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 CPVLQ9H3G5 476 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 CERS4Q9HA82 394 aa16.99■□□□□ 0.31
KDM4B-204ENST00000588166 KIAA1217Q5T5P2 1943 aa16.98■□□□□ 0.31
KDM4B-204ENST00000588166 KPNA6O60684 536 aa16.98■□□□□ 0.31
KDM4B-204ENST00000588166 ACTN1P12814 892 aa16.98■□□□□ 0.31
KDM4B-204ENST00000588166 CASTP20810 708 aaKnown RBP16.98■□□□□ 0.31
KDM4B-204ENST00000588166 PDE4DQ08499 809 aa16.98■□□□□ 0.31
KDM4B-204ENST00000588166 COL9A3Q14050 684 aaPredicted RBP16.98■□□□□ 0.31
KDM4B-204ENST00000588166 FAM47CQ5HY64 1035 aa16.98■□□□□ 0.31
KDM4B-204ENST00000588166 CCDC62Q6P9F0 684 aa16.98■□□□□ 0.31
KDM4B-204ENST00000588166 SPRED2Q7Z698 418 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms