RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 RANBP6O60518 1105 aaKnown RBP6.54□□□□□ -1.36
SDF2-206ENST00000587788 LILRA1O75019 489 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 AOC2O75106 756 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 NR3C2P08235 984 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 PFKFB1P16118 471 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 KIF5BP33176 963 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 SEC13P55735 322 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 HUNKP57058 714 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 RAB15P59190 212 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 PRKG1Q13976 671 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 RASA3Q14644 834 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 RRP12Q5JTH9 1297 aaKnown RBP6.54□□□□□ -1.36
SDF2-206ENST00000587788 DNTTIP2Q5QJE6 756 aaKnown RBP6.54□□□□□ -1.36
SDF2-206ENST00000587788 NBPF12Q5TAG4 269 aaPredicted RBP6.54□□□□□ -1.36
SDF2-206ENST00000587788 OTUD7BQ6GQQ9 843 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 CDC42EP5Q6NZY7 148 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 NBPF11Q86T75 865 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 ZNF598Q86UK7 904 aaKnown RBP6.54□□□□□ -1.36
SDF2-206ENST00000587788 DGKHQ86XP1 1220 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 DIS3L2Q8IYB7 885 aaKnown RBP6.54□□□□□ -1.36
SDF2-206ENST00000587788 CCDC116Q8IYX3 515 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 TPCN2Q8NHX9 752 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 ANKS1AQ92625 1134 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 PHKBQ93100 1093 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 CCDC17Q96LX7 622 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 TEPSINQ96N21 525 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 ZIC5Q96T25 663 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 FTOQ9C0B1 505 aaKnown RBP eCLIP6.54□□□□□ -1.36
SDF2-206ENST00000587788 TMEM39BQ9GZU3 492 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 DEFB129Q9H1M3 183 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 TTC12Q9H892 705 aaPredicted RBP6.54□□□□□ -1.36
SDF2-206ENST00000587788 PLA2G2EQ9NZK7 142 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 TMOD2Q9NZR1 351 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 PKD2L1Q9P0L9 805 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 DACH1Q9UI36 760 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 TUBE1Q9UJT0 475 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 R3HCC1Q9Y3T6 440 aaKnown RBP6.54□□□□□ -1.36
SDF2-206ENST00000587788 CASP8AP2Q9UKL3 1982 aa6.54□□□□□ -1.36
SDF2-206ENST00000587788 TNKSO95271 1327 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 ZSWIM8A7E2V4 1837 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 TRIM75PA6NK02 468 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 FAM155AB1AL88 458 aaPredicted RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 UBE2Q2LH0YL09 131 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 RRP9O43818 475 aaKnown RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 MYCP01106 439 aaPredicted RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 TUBB4AP04350 444 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 HLA-DOAP06340 250 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 TRAPPC10P48553 1259 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 GNAQP50148 359 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 NFIAQ12857 509 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 ARID5BQ14865 1188 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 OCLNQ16625 522 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 PPP1R26Q5T8A7 1209 aaPredicted RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 ZNF697Q5TEC3 545 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 C11orf57Q6ZUT1 292 aaPredicted RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 CCDC186Q7Z3E2 898 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 RAB11FIP4Q86YS3 637 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 DHX40Q8IX18 779 aaKnown RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 C2orf69Q8N8R5 385 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 ENAHQ8N8S7 591 aaPredicted RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 TRIML1Q8N9V2 468 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 SPC24Q8NBT2 197 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 CTCFLQ8NI51 663 aaPredicted RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 FERMT2Q96AC1 680 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 EHD4Q9H223 541 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 TMPRSS4Q9NRS4 437 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 KCND1Q9NSA2 647 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 KCNH3Q9ULD8 1083 aa6.53□□□□□ -1.36
SDF2-206ENST00000587788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.53□□□□□ -1.36
SDF2-206ENST00000587788 SRPRBQ9Y5M8 271 aaKnown RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 V9GY48 417 aaPredicted RBP6.53□□□□□ -1.36
SDF2-206ENST00000587788 TSPY2A6NKD2 308 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 SFI1A8K8P3 1242 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 KIF2AO00139 706 aaPredicted RBP6.52□□□□□ -1.37
SDF2-206ENST00000587788 CCP110O43303 1012 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 WDHD1O75717 1129 aaPredicted RBP6.52□□□□□ -1.37
SDF2-206ENST00000587788 SMC2O95347 1197 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 HSPA1AP0DMV8 641 aaKnown RBP6.52□□□□□ -1.37
SDF2-206ENST00000587788 HSPA1BP0DMV9 641 aaKnown RBP6.52□□□□□ -1.37
SDF2-206ENST00000587788 SLURP2P0DP57 97 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 RXRAP19793 462 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 PTGS1P23219 599 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 CALML3P27482 149 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 GTF2F1P35269 517 aaKnown RBP eCLIP6.52□□□□□ -1.37
SDF2-206ENST00000587788 KRT2P35908 639 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 KCNJ6P48051 423 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 TNNI2P48788 182 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 CDK8P49336 464 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 PLCD1P51178 756 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 TFAP4Q01664 338 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 GALNT17Q6IS24 598 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 RGMBQ6NW40 437 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 SHC4Q6S5L8 630 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 KRBA2Q6ZNG9 492 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 C16orf86Q6ZW13 317 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 FAM83AQ86UY5 434 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
SDF2-206ENST00000587788 RASAL3Q86YV0 1011 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 MAPKAPK5Q8IW41 473 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms