RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 ARIH1Q9Y4X5 557 aaPredicted RBP18.29■□□□□ 0.52
NCLN-203ENST00000587740 MUC6Q6W4X9 2439 aa18.29■□□□□ 0.52
NCLN-203ENST00000587740 PIEZO1Q92508 2521 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 LOC102724159A0A0B4J2E5 919 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 PTPDC1A2A3K4 754 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 LCHNA4D1U4 455 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 A6NJR5 290 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 PWP2Q15269 919 aaKnown RBP18.28■□□□□ 0.52
NCLN-203ENST00000587740 CCDC96Q2M329 555 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 TMCO2Q7Z6W1 182 aaPredicted RBP18.28■□□□□ 0.52
NCLN-203ENST00000587740 RETREG2Q8NC44 543 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 DCAF4Q8WV16 495 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 CTAGE1Q96RT6 745 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 CD320Q9NPF0 282 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 ZSWIM5Q9P217 1185 aa18.28■□□□□ 0.52
NCLN-203ENST00000587740 COL4A4P53420 1690 aaPredicted RBP18.28■□□□□ 0.52
NCLN-203ENST00000587740 KIF28PB7ZC32 967 aa18.27■□□□□ 0.52
NCLN-203ENST00000587740 EIF5BO60841 1220 aaKnown RBP18.27■□□□□ 0.52
NCLN-203ENST00000587740 EDNRBP24530 442 aa18.27■□□□□ 0.52
NCLN-203ENST00000587740 CALML3P27482 149 aa18.27■□□□□ 0.52
NCLN-203ENST00000587740 CCDC178Q5BJE1 867 aa18.27■□□□□ 0.52
NCLN-203ENST00000587740 TMEM31Q5JXX7 168 aa18.27■□□□□ 0.52
NCLN-203ENST00000587740 SYDE2Q5VT97 1194 aa18.27■□□□□ 0.52
NCLN-203ENST00000587740 RALYLQ86SE5 291 aaKnown RBP18.27■□□□□ 0.52
NCLN-203ENST00000587740 TAF6LQ9Y6J9 622 aa18.27■□□□□ 0.52
NCLN-203ENST00000587740 FRMPD2Q68DX3 1309 aaPredicted RBP18.26■□□□□ 0.51
NCLN-203ENST00000587740 NKRFO15226 690 aaKnown RBP eCLIP18.26■□□□□ 0.51
NCLN-203ENST00000587740 EPB41L2O43491 1005 aaKnown RBP18.26■□□□□ 0.51
NCLN-203ENST00000587740 ARIH2O95376 493 aa18.26■□□□□ 0.51
NCLN-203ENST00000587740 PTPN11Q06124 597 aaPredicted RBP18.26■□□□□ 0.51
NCLN-203ENST00000587740 PPP2R5BQ15173 497 aa18.26■□□□□ 0.51
NCLN-203ENST00000587740 GDPD5Q8WTR4 605 aa18.26■□□□□ 0.51
NCLN-203ENST00000587740 TTC14Q96N46 770 aa18.26■□□□□ 0.51
NCLN-203ENST00000587740 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
NCLN-203ENST00000587740 GPCPD1Q9NPB8 672 aa18.26■□□□□ 0.51
NCLN-203ENST00000587740 FAM86C2PA6NEL3 165 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 KPNA6O60684 536 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 GPR37L1O60883 481 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 BAIAP3O94812 1187 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 WDR5P61964 334 aaKnown RBP18.25■□□□□ 0.51
NCLN-203ENST00000587740 RPS6P62753 249 aaKnown RBP18.25■□□□□ 0.51
NCLN-203ENST00000587740 BFSP2Q13515 415 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 TCTN1Q2MV58 587 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 RNF207Q6ZRF8 634 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 STOX1Q6ZVD7 989 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 DHX38Q92620 1227 aaKnown RBP18.25■□□□□ 0.51
NCLN-203ENST00000587740 TMEM47Q9BQJ4 181 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 UBAC1Q9BSL1 405 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 HCN4Q9Y3Q4 1203 aa18.25■□□□□ 0.51
NCLN-203ENST00000587740 TXNP10599 105 aaKnown RBP18.24■□□□□ 0.51
NCLN-203ENST00000587740 TOP1P11387 765 aaKnown RBP18.24■□□□□ 0.51
NCLN-203ENST00000587740 DEFB103AP81534 67 aa18.24■□□□□ 0.51
NCLN-203ENST00000587740 PDE4DQ08499 809 aa18.24■□□□□ 0.51
NCLN-203ENST00000587740 BRDTQ58F21 947 aaPredicted RBP18.24■□□□□ 0.51
NCLN-203ENST00000587740 SCFD2Q8WU76 684 aa18.24■□□□□ 0.51
NCLN-203ENST00000587740 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
NCLN-203ENST00000587740 KCNJ6P48051 423 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 CHMP4BP1P59074 171 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 KRT32Q14532 448 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 PTGISQ16647 500 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 GDF6Q6KF10 455 aaPredicted RBP18.23■□□□□ 0.51
NCLN-203ENST00000587740 CYB5R4Q7L1T6 521 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 DGKHQ86XP1 1220 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 USP26Q9BXU7 913 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 SUGCTQ9HAC7 445 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 NOD1Q9Y239 953 aa18.23■□□□□ 0.51
NCLN-203ENST00000587740 ERICH2A1L162 156 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 PI4K2BG5E9Z4 385 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 PDHBP11177 359 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 HSPA4P34932 840 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 SART3Q15020 963 aaKnown RBP18.22■□□□□ 0.51
NCLN-203ENST00000587740 TSGA10IPQ3SY00 556 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 CCDC62Q6P9F0 684 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 MB21D2Q8IYB1 491 aaPredicted RBP18.22■□□□□ 0.51
NCLN-203ENST00000587740 DNERQ8NFT8 737 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 CAGE1Q8TC20 777 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 AFAP1L1Q8TED9 768 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 AFG1LQ8WV93 481 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 KAT2BQ92831 832 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 LMCD1Q9NZU5 365 aa18.22■□□□□ 0.51
NCLN-203ENST00000587740 NBNO60934 754 aa18.21■□□□□ 0.51
NCLN-203ENST00000587740 CXCL10P02778 98 aa18.21■□□□□ 0.51
NCLN-203ENST00000587740 MCM5P33992 734 aa18.21■□□□□ 0.51
NCLN-203ENST00000587740 SESTD1Q86VW0 696 aa18.21■□□□□ 0.51
NCLN-203ENST00000587740 RASEFQ8IZ41 740 aa18.21■□□□□ 0.51
NCLN-203ENST00000587740 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
NCLN-203ENST00000587740 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.2■□□□□ 0.5
NCLN-203ENST00000587740 IFIT3O14879 490 aaKnown RBP18.2■□□□□ 0.5
NCLN-203ENST00000587740 MMP3P08254 477 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 SELPP16109 830 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 ERVK-21P61565 698 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 RBL2Q08999 1139 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 IFIT1BQ5T764 474 aaKnown RBP18.2■□□□□ 0.5
NCLN-203ENST00000587740 CNKSR3Q6P9H4 555 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 LRRC8DQ7L1W4 858 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 CHST3Q7LGC8 479 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 TBC1D5Q92609 795 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 ANKS1AQ92625 1134 aa18.2■□□□□ 0.5
NCLN-203ENST00000587740 KCNB2Q92953 911 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms