RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 KRT79Q5XKE5 535 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 ALS2CLQ60I27 953 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 TGFBRAP1Q8WUH2 860 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 RIOX1Q9H6W3 641 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 MYH1P12882 1939 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 CDK8P49336 464 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 CYP27A1Q02318 531 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 APBA1Q02410 837 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 PPFIA1Q13136 1202 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 ASPRV1Q53RT3 343 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 RAD54LQ92698 747 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 NOX5Q96PH1 765 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 ARHGAP20Q9P2F6 1191 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 ANKIB1Q9P2G1 1089 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 RBAK-RBAKDNI3L0D1 243 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 PHACTR2O75167 634 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 TM4SF1P30408 202 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 EIF4A3P38919 411 aaKnown RBP20.59■□□□□ 0.89
DDX39A-206ENST00000587730 KLK7P49862 253 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 ADCY7P51828 1080 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 GRB10Q13322 594 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 GRAPQ13588 217 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 SPATA4Q8NEY3 305 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 GRAPLQ8TC17 118 aaPredicted RBP20.59■□□□□ 0.89
DDX39A-206ENST00000587730 OSBPL9Q96SU4 736 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 PLIN4Q96Q06 1357 aa20.59■□□□□ 0.89
DDX39A-206ENST00000587730 SNED1Q8TER0 1413 aa20.58■□□□□ 0.89
DDX39A-206ENST00000587730 GPR75-ASB3A0A0A6YYF3 556 aa20.58■□□□□ 0.89
DDX39A-206ENST00000587730 PDE2AO00408 941 aaPredicted RBP20.58■□□□□ 0.89
DDX39A-206ENST00000587730 EPB41P11171 864 aaKnown RBP20.58■□□□□ 0.89
DDX39A-206ENST00000587730 MAGEA1P43355 309 aa20.58■□□□□ 0.89
DDX39A-206ENST00000587730 LRRC31Q6UY01 552 aa20.58■□□□□ 0.89
DDX39A-206ENST00000587730 FAM163AQ96GL9 167 aaPredicted RBP20.58■□□□□ 0.89
DDX39A-206ENST00000587730 CEP63Q96MT8 703 aa20.58■□□□□ 0.89
DDX39A-206ENST00000587730 RTFDC1Q9BY42 306 aaPredicted RBP20.58■□□□□ 0.89
DDX39A-206ENST00000587730 MMRN2Q9H8L6 949 aa20.58■□□□□ 0.89
DDX39A-206ENST00000587730 SLC39A2Q9NP94 309 aa20.58■□□□□ 0.89
DDX39A-206ENST00000587730 BLOC1S4Q9NUP1 217 aa20.58■□□□□ 0.89
DDX39A-206ENST00000587730 BAZ2BQ9UIF8 2168 aaKnown RBP20.58■□□□□ 0.88
DDX39A-206ENST00000587730 TNRC6CQ9HCJ0 1690 aaKnown RBP20.58■□□□□ 0.88
DDX39A-206ENST00000587730 GOLGA6CA6NDK9 693 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 ZNF263O14978 683 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 GOLGA6DP0CG33 693 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 TXKP42681 527 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 PPP4R3AQ6IN85 833 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 PDXDC1Q6P996 788 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 CACNA2D4Q7Z3S7 1137 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 KRT27Q7Z3Y8 459 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 TXNRD3Q86VQ6 643 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 CAVIN3Q969G5 261 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 BMP2KQ9NSY1 1161 aaPredicted RBP20.57■□□□□ 0.88
DDX39A-206ENST00000587730 RNF216Q9NWF9 866 aaPredicted RBP20.57■□□□□ 0.88
DDX39A-206ENST00000587730 GOLGA6AQ9NYA3 693 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 CEP72Q9P209 647 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 TAF1P21675 1872 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 MYMKA6NI61 221 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 GOLGA8HP0CJ92 632 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 GCFC2P16383 781 aaKnown RBP20.57■□□□□ 0.88
DDX39A-206ENST00000587730 GGCXP38435 758 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 FKBP3Q00688 224 aaKnown RBP20.57■□□□□ 0.88
DDX39A-206ENST00000587730 EHHADHQ08426 723 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 C2orf54Q08AI8 447 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 SLC9C1Q4G0N8 1177 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 TMEM119Q4V9L6 283 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 POTEDQ86YR6 584 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 FAM207AQ9NSI2 230 aaPredicted RBP20.57■□□□□ 0.88
DDX39A-206ENST00000587730 STIM2Q9P246 746 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 C10orf71Q711Q0 1435 aa20.57■□□□□ 0.88
DDX39A-206ENST00000587730 KDM3AQ9Y4C1 1321 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 MAGEA9P43362 315 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 CFAP221Q4G0U5 840 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 DNAJC21Q5F1R6 531 aaKnown RBP20.56■□□□□ 0.88
DDX39A-206ENST00000587730 LRRC55Q6ZSA7 311 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 RRAGAQ7L523 313 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 MAPKAPK5Q8IW41 473 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 TEX11Q8IYF3 940 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 MYOCDQ8IZQ8 938 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.56■□□□□ 0.884e-8■■■■■ 36.3
DDX39A-206ENST00000587730 BAP1Q92560 729 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 NT5C3AQ9H0P0 336 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 GLT8D2Q9H1C3 349 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 TFR2Q9UP52 801 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 DUSP10Q9Y6W6 482 aa20.56■□□□□ 0.88
DDX39A-206ENST00000587730 GRID2IPA4D2P6 1211 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 LRRC53A6NM62 1247 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 ZNF185O15231 689 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 SERPING1P05155 500 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 BTDP43251 543 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 ASTE1Q2TB18 679 aaPredicted RBP20.55■□□□□ 0.88
DDX39A-206ENST00000587730 PNMA5Q96PV4 448 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 PIGSQ96S52 555 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 RUFY1Q96T51 708 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 SH3GL2Q99962 352 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 COL4A3BPQ9Y5P4 624 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 CAPN6Q9Y6Q1 641 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 SLC4A8Q2Y0W8 1093 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 IFT20Q8IY31 132 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 SLC44A5Q8NCS7 719 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 SNX29Q8TEQ0 813 aa20.55■□□□□ 0.88
DDX39A-206ENST00000587730 TBC1D22AQ8WUA7 517 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 677.2 ms