RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 TMCO2Q7Z6W1 182 aaPredicted RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 CHD1LQ86WJ1 897 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 IQCA1Q86XH1 822 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 DGKHQ86XP1 1220 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 ENAHQ8N8S7 591 aaPredicted RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 DNERQ8NFT8 737 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 SYTL5Q8TDW5 730 aaPredicted RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 ADAMTS19Q8TE59 1207 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 ATXN2LQ8WWM7 1075 aaKnown RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 ASB2Q96Q27 587 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 ZSCAN10Q96SZ4 725 aaPredicted RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 RMDN3Q96TC7 470 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 TMEM121BQ9BXQ6 578 aaPredicted RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 RWDD1Q9H446 243 aaPredicted RBP7.5□□□□□ -1.21
SDF2-205ENST00000587629 ZSWIM5Q9P217 1185 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 COL20A1Q9P218 1284 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 THEGQ9P2T0 379 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 PNMA2Q9UL42 364 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 PCDHA11Q9Y5I1 949 aa7.5□□□□□ -1.21
SDF2-205ENST00000587629 LOC102724159A0A0B4J2E5 919 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 EPOPA6NHQ4 379 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 ARHGEF15O94989 841 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 CFBP00751 764 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 GH1P01241 217 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 PFKMP08237 780 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 MMP3P08254 477 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 PARP1P09874 1014 aaKnown RBP7.49□□□□□ -1.21
SDF2-205ENST00000587629 MYCLP12524 364 aaPredicted RBP7.49□□□□□ -1.21
SDF2-205ENST00000587629 ACTN1P12814 892 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 NUBP1P53384 320 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 NUCB1Q02818 461 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 ARHGAP1Q07960 439 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 PWP2Q15269 919 aaKnown RBP7.49□□□□□ -1.21
SDF2-205ENST00000587629 STXBP2Q15833 593 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 ARHGEF16Q5VV41 709 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 GDF6Q6KF10 455 aaPredicted RBP7.49□□□□□ -1.21
SDF2-205ENST00000587629 NFRKBQ6P4R8 1299 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 CCDC62Q6P9F0 684 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 SPRED2Q7Z698 418 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 FBXO11Q86XK2 927 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 SMC5Q8IY18 1101 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 STAG2Q8N3U4 1231 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 RGS22Q8NE09 1264 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 IL27Q8NEV9 243 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 EXOC6Q8TAG9 804 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 NSUN6Q8TEA1 469 aaKnown RBP7.49□□□□□ -1.21
SDF2-205ENST00000587629 ARNTL2Q8WYA1 636 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 FAM212AQ96EL1 285 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 ZFP91Q96JP5 570 aaPredicted RBP7.49□□□□□ -1.21
SDF2-205ENST00000587629 NECAB3Q96P71 396 aaPredicted RBP7.49□□□□□ -1.21
SDF2-205ENST00000587629 ALG1Q9BT22 464 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 JMJD4Q9H9V9 463 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 CHD7Q9P2D1 2997 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 ABCB11O95342 1321 aa7.49□□□□□ -1.21
SDF2-205ENST00000587629 ZNF286BP0CG31 522 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 CASTP20810 708 aaKnown RBP7.48□□□□□ -1.21
SDF2-205ENST00000587629 HOXA13P31271 388 aaPredicted RBP7.48□□□□□ -1.21
SDF2-205ENST00000587629 RFC2P35250 354 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 KCNQ1P51787 676 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 BFSP2Q13515 415 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 IMMTQ16891 758 aaKnown RBP7.48□□□□□ -1.21
SDF2-205ENST00000587629 ASPRV1Q53RT3 343 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 CCDC178Q5BJE1 867 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 TICAM2Q86XR7 235 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 MCF2L2Q86YR7 1114 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 HERC6Q8IVU3 1022 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 C7orf31Q8N865 590 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 GBF1Q92538 1859 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 KAT2BQ92831 832 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 CTAGE1Q96RT6 745 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 UHRF1Q96T88 793 aaPredicted RBP7.48□□□□□ -1.21
SDF2-205ENST00000587629 UBAC1Q9BSL1 405 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 ZBED2Q9BTP6 218 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 HDAC6Q9UBN7 1215 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 RAPGEFL1Q9UHV5 662 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 MRPL11Q9Y3B7 192 aaKnown RBP7.48□□□□□ -1.21
SDF2-205ENST00000587629 PCDHB13Q9Y5F0 798 aa7.48□□□□□ -1.21
SDF2-205ENST00000587629 REV3LO60673 3130 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 SCN5AQ14524 2016 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 LCHNA4D1U4 455 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 KIF28PB7ZC32 967 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 KLRF2D3W0D1 207 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 OPLAHO14841 1288 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 GTPBP6O43824 516 aaPredicted RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 TLL1O43897 1013 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 PPP1R11O60927 126 aaPredicted RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 EIF3JO75822 258 aaKnown RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 NR3C2P08235 984 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 SELPP16109 830 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 KCNJ6P48051 423 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 PSEN2P49810 448 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 TAP1Q03518 808 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 PTPN11Q06124 597 aaPredicted RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 GPNMBQ14956 572 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 DGKDQ16760 1214 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 TCTN1Q2MV58 587 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 IFIT1BQ5T764 474 aaKnown RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 FAM117BQ6P1L5 589 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 CYB5R4Q7L1T6 521 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms