RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
MKS1-213ENST00000585134 OGDHLQ9ULD0 1010 aa16.2■□□□□ 0.18
MKS1-213ENST00000585134 SORBS3O60504 671 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 ARIH2O95376 493 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 FDPSP14324 419 aaKnown RBP16.19■□□□□ 0.18
MKS1-213ENST00000585134 XBP1P17861 261 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 CLK2P49760 499 aaKnown RBP16.19■□□□□ 0.18
MKS1-213ENST00000585134 IRX5P78411 483 aaPredicted RBP16.19■□□□□ 0.18
MKS1-213ENST00000585134 AP3B2Q13367 1082 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 BICD2Q8TD16 824 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 SCFD2Q8WU76 684 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 COPS5Q92905 334 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 RTEL1Q9NZ71 1219 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 MRVI1Q9Y6F6 885 aa16.19■□□□□ 0.18
MKS1-213ENST00000585134 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 DUSP11O75319 330 aaKnown RBP16.18■□□□□ 0.18
MKS1-213ENST00000585134 EIF3JO75822 258 aaKnown RBP16.18■□□□□ 0.18
MKS1-213ENST00000585134 C6orf222P0C671 652 aaPredicted RBP16.18■□□□□ 0.18
MKS1-213ENST00000585134 GUCY1B3Q02153 619 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 TRIM29Q14134 588 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 TTLL4Q14679 1199 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 IQSEC1Q6DN90 963 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 VSIG10LQ86VR7 867 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 BLIDQ8IZY5 108 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 FAM184AQ8NB25 1140 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 OR6J1Q8NGC5 347 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 PCDHA4Q9UN74 947 aa16.18■□□□□ 0.18
MKS1-213ENST00000585134 KIAA1217Q5T5P2 1943 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 RBM47A0AV96 593 aaKnown RBP16.17■□□□□ 0.18
MKS1-213ENST00000585134 KBTBD13C9JR72 458 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 DYNC1LI2O43237 492 aaPredicted RBP16.17■□□□□ 0.18
MKS1-213ENST00000585134 FOSP01100 380 aaPredicted RBP16.17■□□□□ 0.18
MKS1-213ENST00000585134 TXNP10599 105 aaKnown RBP16.17■□□□□ 0.18
MKS1-213ENST00000585134 MRPS9P82933 396 aaKnown RBP16.17■□□□□ 0.18
MKS1-213ENST00000585134 BEX3Q00994 111 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 LRRC41Q15345 812 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 LY6KQ17RY6 165 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 PCNX4Q63HM2 1172 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 IL27Q8NEV9 243 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 LLPHQ9BRT6 129 aaKnown RBP16.17■□□□□ 0.18
MKS1-213ENST00000585134 AP5M1Q9H0R1 490 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 SPC25Q9HBM1 224 aa16.17■□□□□ 0.18
MKS1-213ENST00000585134 ADAMTS4O75173 837 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 RGS20O76081 388 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 SREBF1P36956 1147 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 HMGN5P82970 282 aaKnown RBP16.16■□□□□ 0.18
MKS1-213ENST00000585134 ARHGAP4P98171 946 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 GNPTABQ3T906 1256 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 DUSP28Q4G0W2 176 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 RNF180Q86T96 592 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 DAGLBQ8NCG7 672 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 ARRDC4Q8NCT1 418 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 PAWRQ96IZ0 340 aaKnown RBP16.16■□□□□ 0.18
MKS1-213ENST00000585134 PHF20Q9BVI0 1012 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 PKD2L1Q9P0L9 805 aa16.16■□□□□ 0.18
MKS1-213ENST00000585134 GNEQ9Y223 722 aaKnown RBP16.16■□□□□ 0.18
MKS1-213ENST00000585134 DNM1LO00429 736 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 ZNF76P36508 570 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 NPY5RQ15761 445 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 XRRA1Q6P2D8 792 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 NLRX1Q86UT6 975 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 ANKLE1Q8NAG6 615 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 C8orf76Q96K31 380 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 UPF3AQ9H1J1 476 aaKnown RBP16.15■□□□□ 0.18
MKS1-213ENST00000585134 C11orf49Q9H6J7 331 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 BRMS1Q9HCU9 246 aa16.15■□□□□ 0.18
MKS1-213ENST00000585134 NKRFO15226 690 aaKnown RBP eCLIP16.14■□□□□ 0.17
MKS1-213ENST00000585134 FIBPO43427 364 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 STAM2O75886 525 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 GH1P01241 217 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 UBA1P22314 1058 aaKnown RBP16.14■□□□□ 0.17
MKS1-213ENST00000585134 KRT2P35908 639 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 MNX1P50219 401 aaPredicted RBP16.14■□□□□ 0.17
MKS1-213ENST00000585134 GJA9P57773 515 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 SEMA3FQ13275 785 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 KRT40Q6A162 431 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 MCTP2Q6DN12 878 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 CCDC62Q6P9F0 684 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 FAM177A1Q8N128 213 aaPredicted RBP16.14■□□□□ 0.17
MKS1-213ENST00000585134 OXER1Q8TDS5 423 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 FERMT2Q96AC1 680 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 INPP4AQ96PE3 977 aaPredicted RBP16.14■□□□□ 0.17
MKS1-213ENST00000585134 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 UBIAD1Q9Y5Z9 338 aa16.14■□□□□ 0.17
MKS1-213ENST00000585134 MYH7BA7E2Y1 1941 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 CCDC194A0A1B0GVG4 234 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 GGPS1O95749 300 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 ITGB5P18084 799 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 GJB2P29033 226 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 ARHGAP1Q07960 439 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 FSCN1Q16658 493 aaKnown RBP16.13■□□□□ 0.17
MKS1-213ENST00000585134 GNASQ5JWF2 1037 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 GALNT17Q6IS24 598 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 KRT25Q7Z3Z0 450 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 DHX37Q8IY37 1157 aaKnown RBP16.13■□□□□ 0.17
MKS1-213ENST00000585134 UIMC1Q96RL1 719 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms