RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 PPP1R13LQ8WUF5 828 aa19.84■□□□□ 0.77
ITGB4-213ENST00000584939 RRP36Q96EU6 259 aaKnown RBP19.84■□□□□ 0.77
ITGB4-213ENST00000584939 LZTS2Q9BRK4 669 aa19.84■□□□□ 0.77
ITGB4-213ENST00000584939 SPZ1Q9BXG8 430 aa19.84■□□□□ 0.77
ITGB4-213ENST00000584939 MRVI1Q9Y6F6 885 aa19.84■□□□□ 0.77
ITGB4-213ENST00000584939 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.83■□□□□ 0.77
ITGB4-213ENST00000584939 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.83■□□□□ 0.77
ITGB4-213ENST00000584939 SMARCA1P28370 1054 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 GNAQP50148 359 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 CCL23P55773 120 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 PGM5Q15124 567 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 NFRKBQ6P4R8 1299 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 ZNF365Q70YC5 407 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 VSIG10LQ86VR7 867 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 GUCD1Q96NT3 240 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 LRRC2Q9BYS8 371 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 IL23AQ9NPF7 189 aa19.83■□□□□ 0.77
ITGB4-213ENST00000584939 PLEKHA8P1O95397 391 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 MMP3P08254 477 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 CALM1P0DP23 149 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 CALM2P0DP24 149 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 CALM3P0DP25 149 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 CYP2C9P11712 490 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 CHMP4BP1P59074 171 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 PSRC1Q6PGN9 363 aaPredicted RBP19.82■□□□□ 0.76
ITGB4-213ENST00000584939 IL31RAQ8NI17 732 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 SEMA6BQ9H3T3 888 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 SLC12A7Q9Y666 1083 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 MYH6P13533 1939 aa19.82■□□□□ 0.76
ITGB4-213ENST00000584939 RGS20O76081 388 aa19.81■□□□□ 0.76
ITGB4-213ENST00000584939 RXRAP19793 462 aa19.81■□□□□ 0.76
ITGB4-213ENST00000584939 CASTP20810 708 aaKnown RBP19.81■□□□□ 0.76
ITGB4-213ENST00000584939 CCND2P30279 289 aa19.81■□□□□ 0.76
ITGB4-213ENST00000584939 PTPN11Q06124 597 aaPredicted RBP19.81■□□□□ 0.76
ITGB4-213ENST00000584939 LAMC2Q13753 1193 aa19.81■□□□□ 0.76
ITGB4-213ENST00000584939 DHX37Q8IY37 1157 aaKnown RBP19.81■□□□□ 0.76
ITGB4-213ENST00000584939 SRBD1Q8N5C6 995 aaKnown RBP19.81■□□□□ 0.76
ITGB4-213ENST00000584939 EMID1Q96A84 441 aaPredicted RBP19.81■□□□□ 0.76
ITGB4-213ENST00000584939 WNT8AQ9H1J5 351 aa19.81■□□□□ 0.76
ITGB4-213ENST00000584939 SEC63Q9UGP8 760 aaKnown RBP19.81■□□□□ 0.76
ITGB4-213ENST00000584939 FGBP02675 491 aa19.8■□□□□ 0.76
ITGB4-213ENST00000584939 DGKDQ16760 1214 aa19.8■□□□□ 0.76
ITGB4-213ENST00000584939 RASIP1Q5U651 963 aa19.8■□□□□ 0.76
ITGB4-213ENST00000584939 KCNV1Q6PIU1 500 aa19.8■□□□□ 0.76
ITGB4-213ENST00000584939 RAB11FIP4Q86YS3 637 aa19.8■□□□□ 0.76
ITGB4-213ENST00000584939 CMTR1Q8N1G2 835 aaKnown RBP19.8■□□□□ 0.76
ITGB4-213ENST00000584939 ZFP91Q96JP5 570 aaPredicted RBP19.8■□□□□ 0.76
ITGB4-213ENST00000584939 NEK1Q96PY6 1258 aa19.8■□□□□ 0.76
ITGB4-213ENST00000584939 SGMS1Q86VZ5 419 aa19.79■□□□□ 0.76
ITGB4-213ENST00000584939 RPUSD2Q8IZ73 545 aaKnown RBP19.79■□□□□ 0.76
ITGB4-213ENST00000584939 PPTC7Q8NI37 304 aa19.79■□□□□ 0.76
ITGB4-213ENST00000584939 HERVK_113Q902F9 699 aa19.79■□□□□ 0.76
ITGB4-213ENST00000584939 KAT2BQ92831 832 aa19.79■□□□□ 0.76
ITGB4-213ENST00000584939 SCLYQ96I15 445 aa19.79■□□□□ 0.76
ITGB4-213ENST00000584939 TTYH1Q9H313 450 aaPredicted RBP19.79■□□□□ 0.76
ITGB4-213ENST00000584939 TGFB3P10600 412 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 CELF3Q5SZQ8 465 aaKnown RBP19.78■□□□□ 0.76
ITGB4-213ENST00000584939 MYSM1Q5VVJ2 828 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 CCDC82Q8N4S0 544 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 FANCBQ8NB91 859 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 SLC17A8Q8NDX2 589 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 SMARCC2Q8TAQ2 1214 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 CUL5Q93034 780 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 CDX2Q99626 313 aaPredicted RBP19.78■□□□□ 0.76
ITGB4-213ENST00000584939 NOD1Q9Y239 953 aa19.78■□□□□ 0.76
ITGB4-213ENST00000584939 BAZ2BQ9UIF8 2168 aaKnown RBP19.78■□□□□ 0.76
ITGB4-213ENST00000584939 SORBS3O60504 671 aa19.77■□□□□ 0.76
ITGB4-213ENST00000584939 DNAJB2P25686 324 aa19.77■□□□□ 0.76
ITGB4-213ENST00000584939 EXOSC10Q01780 885 aaKnown RBP19.77■□□□□ 0.76
ITGB4-213ENST00000584939 SP2Q02086 613 aa19.77■□□□□ 0.76
ITGB4-213ENST00000584939 TSGA10IPQ3SY00 556 aa19.77■□□□□ 0.76
ITGB4-213ENST00000584939 USP17L6PQ6QN14 398 aa19.77■□□□□ 0.76
ITGB4-213ENST00000584939 DHX32Q7L7V1 743 aaKnown RBP19.77■□□□□ 0.76
ITGB4-213ENST00000584939 OTOP2Q7RTS6 562 aa19.77■□□□□ 0.76
ITGB4-213ENST00000584939 MICU3Q86XE3 530 aa19.77■□□□□ 0.76
ITGB4-213ENST00000584939 GPKOWQ92917 476 aaPredicted RBP eCLIP19.77■□□□□ 0.76
ITGB4-213ENST00000584939 SPATA33Q96N06 139 aa19.77■□□□□ 0.76
ITGB4-213ENST00000584939 MTIF3Q9H2K0 278 aaKnown RBP19.77■□□□□ 0.76
ITGB4-213ENST00000584939 CXXC1Q9P0U4 656 aaPredicted RBP19.77■□□□□ 0.76
ITGB4-213ENST00000584939 SCN10AQ9Y5Y9 1956 aa19.77■□□□□ 0.75
ITGB4-213ENST00000584939 TMEM265A0A087WTH1 108 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 hCG_1642624A0A1W2PR95 340 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 GRXCR1A8MXD5 290 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 GGPS1O95749 300 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 PSEN2P49810 448 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 MRPS9P82933 396 aaKnown RBP19.76■□□□□ 0.75
ITGB4-213ENST00000584939 PTGISQ16647 500 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 ADCK5Q3MIX3 580 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 TMTC3Q6ZXV5 915 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 SESTD1Q86VW0 696 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 RETREG2Q8NC44 543 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 TCEANC2Q96MN5 208 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 FRMPD4Q14CM0 1322 aa19.76■□□□□ 0.75
ITGB4-213ENST00000584939 PIK3CDO00329 1044 aa19.75■□□□□ 0.75
ITGB4-213ENST00000584939 MEIS2O14770 477 aa19.75■□□□□ 0.75
ITGB4-213ENST00000584939 PPFIA4O75335 1185 aa19.75■□□□□ 0.75
ITGB4-213ENST00000584939 STAM2O75886 525 aa19.75■□□□□ 0.75
ITGB4-213ENST00000584939 ZNF286BP0CG31 522 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms