RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 ZNF76P36508 570 aa20.57■□□□□ 0.88
NDEL1-217ENST00000583683 MRPS9P82933 396 aaKnown RBP20.57■□□□□ 0.88
NDEL1-217ENST00000583683 KCTD2Q14681 263 aa20.57■□□□□ 0.88
NDEL1-217ENST00000583683 CALCRLQ16602 461 aa20.57■□□□□ 0.88
NDEL1-217ENST00000583683 PRR16Q569H4 304 aa20.57■□□□□ 0.88
NDEL1-217ENST00000583683 FAM133AQ8N9E0 248 aa20.57■□□□□ 0.88
NDEL1-217ENST00000583683 ASTN1O14525 1302 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 DNAJC25-GNG10A0A024R161 153 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 VWA3AA6NCI4 1184 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 CA12O43570 354 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 MBD3O95983 291 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 CEP55Q53EZ4 464 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 SHC4Q6S5L8 630 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 REM2Q8IYK8 340 aaPredicted RBP20.56■□□□□ 0.88
NDEL1-217ENST00000583683 ZNF579Q8NAF0 562 aaKnown RBP20.56■□□□□ 0.88
NDEL1-217ENST00000583683 DNERQ8NFT8 737 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 ZFP91Q96JP5 570 aaPredicted RBP20.56■□□□□ 0.88
NDEL1-217ENST00000583683 KCNMB3Q9NPA1 279 aa20.56■□□□□ 0.88
NDEL1-217ENST00000583683 POTEB2H3BUK9 544 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 CMA1P23946 247 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 KLHL40Q2TBA0 621 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 SKOR2Q2VWA4 1001 aaPredicted RBP20.55■□□□□ 0.88
NDEL1-217ENST00000583683 DTHD1Q6ZMT9 781 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 CCAR1Q8IX12 1150 aaKnown RBP20.55■□□□□ 0.88
NDEL1-217ENST00000583683 HAS1Q92839 578 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 CSRNP2Q9H175 543 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 PLXNA1Q9UIW2 1896 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 ALDH1A1P00352 501 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 PGK2P07205 417 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 ITGB5P18084 799 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 SPECC1Q5M775 1068 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 VSIG10LQ86VR7 867 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 ETNPPLQ8TBG4 499 aa20.55■□□□□ 0.88
NDEL1-217ENST00000583683 SOWAHBA6NEL2 793 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 MEIS1O00470 390 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 STRNO43815 780 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 NR3C2P08235 984 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 LIG1P18858 919 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 VEGFBP49765 207 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 RESP18Q5W5W9 173 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 GPR142Q7Z601 462 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 FSIP1Q8NA03 581 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 MRPS27Q92552 414 aaKnown RBP20.54■□□□□ 0.88
NDEL1-217ENST00000583683 MXRA8Q9BRK3 442 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 GOLPH3LQ9H4A5 285 aa20.54■□□□□ 0.88
NDEL1-217ENST00000583683 MYCLP12524 364 aaPredicted RBP20.53■□□□□ 0.88
NDEL1-217ENST00000583683 MAPK4P31152 587 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 TXKP42681 527 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 ALDH5A1P51649 535 aaPredicted RBP20.53■□□□□ 0.88
NDEL1-217ENST00000583683 XRRA1Q6P2D8 792 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 ABRAQ8N0Z2 381 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 GJA10Q969M2 543 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 FGD4Q96M96 766 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
NDEL1-217ENST00000583683 UBIAD1Q9Y5Z9 338 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 KIAA1217Q5T5P2 1943 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 LRRC37A2A6NM11 1700 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 DOCK3Q8IZD9 2030 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 A0A1B0GVL5 298 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 TBX3O15119 743 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 MSH4O15457 936 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 CCND2P30279 289 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 MAP2K2P36507 400 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 PLA2G4DQ86XP0 818 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 IWS1Q96ST2 819 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 IVNS1ABPQ9Y6Y0 642 aa20.53■□□□□ 0.88
NDEL1-217ENST00000583683 ZNF236Q9UL36 1845 aa20.52■□□□□ 0.88
NDEL1-217ENST00000583683 ADORA2AP29274 412 aa20.52■□□□□ 0.88
NDEL1-217ENST00000583683 LONP1P36776 959 aaKnown RBP20.52■□□□□ 0.88
NDEL1-217ENST00000583683 SETQ01105 290 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-217ENST00000583683 USP49Q70CQ1 688 aa20.52■□□□□ 0.88
NDEL1-217ENST00000583683 NIPA1Q7RTP0 329 aa20.52■□□□□ 0.88
NDEL1-217ENST00000583683 UIMC1Q96RL1 719 aa20.52■□□□□ 0.88
NDEL1-217ENST00000583683 WDR11Q9BZH6 1224 aa20.52■□□□□ 0.88
NDEL1-217ENST00000583683 TTC12Q9H892 705 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-217ENST00000583683 THSD7BQ9C0I4 1608 aa20.52■□□□□ 0.88
NDEL1-217ENST00000583683 FAM237AA0A1B0GTK4 181 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 PFKFB1P16118 471 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 TECP42680 631 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 FXR2P51116 673 aaKnown RBP eCLIP20.51■□□□□ 0.87
NDEL1-217ENST00000583683 NDUFA8P51970 172 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 GRB14Q14449 540 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 PLEKHH3Q7Z736 793 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 SLFN12Q8IYM2 578 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 EPSTI1Q96J88 318 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 FAM20AQ96MK3 541 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 JADE2Q9NQC1 790 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 HPSEQ9Y251 543 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 MCM3APO60318 1980 aa20.51■□□□□ 0.87
NDEL1-217ENST00000583683 MARCH6O60337 910 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 NR1I2O75469 434 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 ARP10275 920 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 EDNRBP24530 442 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 SNW1Q13573 536 aaKnown RBP20.5■□□□□ 0.87
NDEL1-217ENST00000583683 IGSF22Q8N9C0 903 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 ENGASEQ8NFI3 743 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 KCNH7Q9NS40 1196 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 PCDHA12Q9UN75 941 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 MGAMO43451 1857 aa20.5■□□□□ 0.87
NDEL1-217ENST00000583683 COBLO75128 1261 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms