RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 MCM6Q14566 821 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 MARCH10Q8NA82 808 aaPredicted RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 ERGIC2Q96RQ1 377 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 TMOD4Q9NZQ9 345 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 FAM205AQ6ZU69 1335 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 MIF4GDA9UHW6 222 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 THAP12O43422 761 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 PLEKHA8P1O95397 391 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 PLCG1P19174 1290 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 ERCC6LQ2NKX8 1250 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 ZNF662Q6ZS27 426 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 RRAGAQ7L523 313 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 CELF1Q92879 486 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 CHAMP1Q96JM3 812 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 DRC1Q96MC2 740 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 MKNK1Q9BUB5 465 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 KIAA1586Q9HCI6 787 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 SAMM50Q9Y512 469 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 COL14A1Q05707 1796 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 CAMTA1Q9Y6Y1 1673 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 MYBPC2Q14324 1141 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 SYDE2Q5VT97 1194 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 FRMD5Q7Z6J6 570 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 C2CD5Q86YS7 1000 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 KCNF1Q9H3M0 494 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 TUFT1Q9NNX1 390 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 PUF60Q9UHX1 559 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 MRFAP1Q9Y605 127 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 SRGNP10124 158 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 CALRP27797 417 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 EIF3BP55884 814 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 CCDC144BQ3MJ40 725 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 DNAJC21Q5F1R6 531 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 NCAPH2Q6IBW4 605 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 NIM1KQ8IY84 436 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 PIGSQ96S52 555 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 ANO3Q9BYT9 981 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 MRPL44Q9H9J2 332 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 GPHNQ9NQX3 736 aaPredicted RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 SAMSN1Q9NSI8 373 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 PCDHA6Q9UN73 950 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 PCDHA8Q9Y5H6 950 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 PALM3A6NDB9 673 aaPredicted RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 LRRC10BA6NIK2 292 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 PDXKO00764 312 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 PFASO15067 1338 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 P4HA2O15460 535 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 NF2P35240 595 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 LMNB2Q03252 620 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 EXOC3L4Q17RC7 722 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 ARMCX5Q6P1M9 558 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 RHOT2Q8IXI1 618 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 INTUQ9ULD6 942 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 IL1R1P14778 569 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 ATP2A2P16615 1042 aaKnown RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 JAK3P52333 1124 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 SURF1Q15526 300 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 CDKAL1Q5VV42 579 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 TBC1D9BQ66K14 1250 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 CCHCR1Q8TD31 782 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 GPKOWQ92917 476 aaPredicted RBP eCLIP6.42□□□□□ -1.38
RTTN-209ENST00000583043 ATP6V0A1Q93050 837 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 EPSTI1Q96J88 318 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.42□□□□□ -1.38
RTTN-209ENST00000583043 PSD3Q9NYI0 1048 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 USP17L3A6NCW0 530 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 USP17L4A6NCW7 530 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 GOLGA6CA6NDK9 693 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 PSMD14O00487 310 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 SART1O43290 800 aaKnown RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 GOLGA6DP0CG33 693 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 ZNF18P17022 549 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 HOXA10P31260 410 aaPredicted RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 COPB2P35606 906 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 ACTN2P35609 894 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 LONRF2Q1L5Z9 754 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 STRIP1Q5VSL9 837 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 TAOK1Q7L7X3 1001 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 USP17L1Q7RTZ2 530 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 MIER3Q7Z3K6 550 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 KRT27Q7Z3Y8 459 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 C17orf53Q8N3J3 647 aaPredicted RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 ARHGEF1Q92888 912 aaKnown RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 HVCN1Q96D96 273 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 LSM14BQ9BX40 385 aaKnown RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 GOLGA6AQ9NYA3 693 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 EXOC3O60645 756 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 USP17L8P0C7I0 530 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 STYK1Q6J9G0 422 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 PEX26Q7Z412 305 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 CERKQ8TCT0 537 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 AIFM3Q96NN9 605 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 ACCSQ96QU6 501 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 EMILIN3Q9NT22 766 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 TBC1D22BQ9NU19 505 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 TYW1Q9NV66 732 aaKnown RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 ODF2LQ9ULJ1 636 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 MACROD2A1Z1Q3 448 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 ATP1A3P13637 1013 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms