RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	CCDC178	Q5BJE1	867 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	SEPT14	Q6ZU15	432 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	IQCA1	Q86XH1	822 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	ADGRF4	Q8IZF3	695 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	IL27	Q8NEV9	243 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	PHOSPHO2	Q8TCD6	241 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	NSUN6	Q8TEA1	469 aa	Known RBP	11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	AFG1L	Q8WV93	481 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	ANKS1A	Q92625	1134 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	TAAR1	Q96RJ0	339 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	UHRF1	Q96T88	793 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	KAT14	Q9H8E8	782 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	COL20A1	Q9P218	1284 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	PCDHB13	Q9Y5F0	798 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	TANC1	Q9C0D5	1861 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	LAMA4	Q16363	1823 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	EPOP	A6NHQ4	379 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985		B4E1Z4	1266 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	RFXAP	O00287	272 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	GH1	P01241	217 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	POU3F3	P20264	500 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	ARHGAP1	Q07960	439 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	STXBP2	Q15833	593 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	PTGIS	Q16647	500 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	QRICH1	Q2TAL8	776 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	ASPRV1	Q53RT3	343 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	GDF6	Q6KF10	455 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	B4GALNT3	Q6L9W6	998 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	CWC27	Q6UX04	472 aa	Known RBP	11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	SESTD1	Q86VW0	696 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	MCF2L2	Q86YR7	1114 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	HERC6	Q8IVU3	1022 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	PLEKHM2	Q8IWE5	1019 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	SMC5	Q8IY18	1101 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	CCDC155	Q8N6L0	562 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	ENAH	Q8N8S7	591 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	CAGE1	Q8TC20	777 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	KAT2B	Q92831	832 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	CTAGE1	Q96RT6	745 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	IWS1	Q96ST2	819 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	RMDN3	Q96TC7	470 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	OSBPL3	Q9H4L5	887 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	CERS4	Q9HA82	394 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	SCUBE2	Q9NQ36	999 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	DIAPH3	Q9NSV4	1193 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	MTCH2	Q9Y6C9	303 aa		11.15	□□□□□ -0.62
DDX42-215	ENST00000582985	KIF28P	B7ZC32	967 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	GTPBP6	O43824	516 aa	Predicted RBP	11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	DHX16	O60231	1041 aa	Known RBP	11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	BAIAP3	O94812	1187 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	ARHGEF15	O94989	841 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	PARP1	P09874	1014 aa	Known RBP	11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	CAST	P20810	708 aa	Known RBP	11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	TFF2	Q03403	129 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	TAP1	Q03518	808 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	AAMP	Q13685	434 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	SKIV2L	Q15477	1246 aa	Known RBP	11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	ARHGEF16	Q5VV41	709 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	CHST3	Q7LGC8	479 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	CHD1L	Q86WJ1	897 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	FBXO11	Q86XK2	927 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	AFAP1L1	Q8TED9	768 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	ARNTL2	Q8WYA1	636 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	RWDD1	Q9H446	243 aa	Predicted RBP	11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	JMJD4	Q9H9V9	463 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	VAT1L	Q9HCJ6	419 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	ZSWIM5	Q9P217	1185 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	MRPL11	Q9Y3B7	192 aa	Known RBP	11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	BDP1	A6H8Y1	2624 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	TRANK1	O15050	2925 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	XIRP2	A4UGR9	3374 aa		11.14	□□□□□ -0.63
DDX42-215	ENST00000582985	REV3L	O60673	3130 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	NCOR1	O75376	2440 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	EIF3J	O75822	258 aa	Known RBP	11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	BMP1	P13497	986 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	SELP	P16109	830 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	EIF2AK2	P19525	551 aa	Known RBP	11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	COL9A1	P20849	921 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	KCNJ6	P48051	423 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	NUCB1	Q02818	461 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	GPNMB	Q14956	572 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	DGKD	Q16760	1214 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	IMMT	Q16891	758 aa	Known RBP	11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	AAK1	Q2M2I8	961 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	KRT40	Q6A162	431 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	LRRC8D	Q7L1W4	858 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	TET1	Q8NFU7	2136 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	DHX38	Q92620	1227 aa	Known RBP	11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	EMID1	Q96A84	441 aa	Predicted RBP	11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	NECAB3	Q96P71	396 aa	Predicted RBP	11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	DSCC1	Q9BVC3	393 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	PXMP2	Q9NR77	195 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	GTF2IRD1	Q9UHL9	959 aa		11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	DDX41	Q9UJV9	622 aa	Known RBP	11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.13	□□□□□ -0.63
DDX42-215	ENST00000582985	KIAA1217	Q5T5P2	1943 aa		11.12	□□□□□ -0.63
DDX42-215	ENST00000582985	HIP1	O00291	1037 aa		11.12	□□□□□ -0.63
DDX42-215	ENST00000582985	OPLAH	O14841	1288 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 1092.9 ms