RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 CAGE1Q8TC20 777 aa16.84■□□□□ 0.29
ITGB4-208ENST00000582629 IL25Q9H293 177 aa16.84■□□□□ 0.29
ITGB4-208ENST00000582629 PRDM6Q9NQX0 595 aa16.84■□□□□ 0.29
ITGB4-208ENST00000582629 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
ITGB4-208ENST00000582629 THEGQ9P2T0 379 aa16.84■□□□□ 0.29
ITGB4-208ENST00000582629 DDX41Q9UJV9 622 aaKnown RBP16.84■□□□□ 0.29
ITGB4-208ENST00000582629 NR3C2P08235 984 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 HSD17B4P51659 736 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 TRDNQ13061 729 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 TTC22Q5TAA0 569 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 CYB5R4Q7L1T6 521 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 CHST3Q7LGC8 479 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 PHOSPHO2Q8TCD6 241 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 AFAP1L1Q8TED9 768 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 ATXN2LQ8WWM7 1075 aaKnown RBP16.83■□□□□ 0.28
ITGB4-208ENST00000582629 KAT2BQ92831 832 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.28
ITGB4-208ENST00000582629 FTOQ9C0B1 505 aaKnown RBP eCLIP16.83■□□□□ 0.28
ITGB4-208ENST00000582629 MAP3K20Q9NYL2 800 aaKnown RBP16.83■□□□□ 0.28
ITGB4-208ENST00000582629 MRVI1Q9Y6F6 885 aa16.83■□□□□ 0.28
ITGB4-208ENST00000582629 KLRF2D3W0D1 207 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 OPLAHO14841 1288 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 ZBTB5O15062 677 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 LAMC2Q13753 1193 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 DGKDQ16760 1214 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 GDF6Q6KF10 455 aaPredicted RBP16.82■□□□□ 0.28
ITGB4-208ENST00000582629 SAMD3Q8N6K7 520 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 MTMR8Q96EF0 704 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 KATNAL1Q9BW62 490 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
ITGB4-208ENST00000582629 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-208ENST00000582629 BAIAP3O94812 1187 aa16.81■□□□□ 0.28
ITGB4-208ENST00000582629 GSPT1P15170 499 aaKnown RBP16.81■□□□□ 0.28
ITGB4-208ENST00000582629 PDE4AP27815 886 aa16.81■□□□□ 0.28
ITGB4-208ENST00000582629 CCDC85BQ15834 202 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-208ENST00000582629 RUFY2Q8WXA3 655 aa16.81■□□□□ 0.28
ITGB4-208ENST00000582629 PDCD2LQ9BRP1 358 aa16.81■□□□□ 0.28
ITGB4-208ENST00000582629 GTF2IRD1Q9UHL9 959 aa16.81■□□□□ 0.28
ITGB4-208ENST00000582629 CHD9Q3L8U1 2897 aa16.81■□□□□ 0.28
ITGB4-208ENST00000582629 BAZ2BQ9UIF8 2168 aaKnown RBP16.8■□□□□ 0.28
ITGB4-208ENST00000582629 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 PPP1R11O60927 126 aaPredicted RBP16.8■□□□□ 0.28
ITGB4-208ENST00000582629 PARNO95453 639 aaKnown RBP16.8■□□□□ 0.28
ITGB4-208ENST00000582629 CA3P07451 260 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 SELPP16109 830 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 PSEN2P49810 448 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 RBL2Q08999 1139 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 TRAF1Q13077 416 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 GRM4Q14833 912 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 KCNV1Q6PIU1 500 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 LRRC8DQ7L1W4 858 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
ITGB4-208ENST00000582629 C7orf31Q8N865 590 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 PPTC7Q8NI37 304 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 CTAGE1Q96RT6 745 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 TSPYL2Q9H2G4 693 aaPredicted RBP16.8■□□□□ 0.28
ITGB4-208ENST00000582629 PCDHA1Q9Y5I3 950 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
ITGB4-208ENST00000582629 PTPRSQ13332 1948 aa16.8■□□□□ 0.28
ITGB4-208ENST00000582629 ERICH2A1L162 156 aa16.79■□□□□ 0.28
ITGB4-208ENST00000582629 F2P00734 622 aa16.79■□□□□ 0.28
ITGB4-208ENST00000582629 CYP21A2P08686 494 aa16.79■□□□□ 0.28
ITGB4-208ENST00000582629 MYCLP12524 364 aaPredicted RBP16.79■□□□□ 0.28
ITGB4-208ENST00000582629 MRPS5P82675 430 aaKnown RBP16.79■□□□□ 0.28
ITGB4-208ENST00000582629 STOX1Q6ZVD7 989 aa16.79■□□□□ 0.28
ITGB4-208ENST00000582629 HOMER1Q86YM7 354 aa16.79■□□□□ 0.28
ITGB4-208ENST00000582629 HERC6Q8IVU3 1022 aa16.79■□□□□ 0.28
ITGB4-208ENST00000582629 ASB2Q96Q27 587 aa16.79■□□□□ 0.28
ITGB4-208ENST00000582629 HDAC6Q9UBN7 1215 aa16.79■□□□□ 0.28
ITGB4-208ENST00000582629 CHD7Q9P2D1 2997 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
ITGB4-208ENST00000582629 HAS3O00219 553 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 TNFRSF10AO00220 468 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 IFIT3O14879 490 aaKnown RBP16.78■□□□□ 0.28
ITGB4-208ENST00000582629 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 ZNF286BP0CG31 522 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 HOXD8P13378 290 aaPredicted RBP16.78■□□□□ 0.28
ITGB4-208ENST00000582629 KCNJ6P48051 423 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 MFSD10Q14728 455 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 PGM5Q15124 567 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 KIAA0753Q2KHM9 967 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 RALYLQ86SE5 291 aaKnown RBP16.78■□□□□ 0.28
ITGB4-208ENST00000582629 VSIG10LQ86VR7 867 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 DHX38Q92620 1227 aaKnown RBP16.78■□□□□ 0.28
ITGB4-208ENST00000582629 ALG1Q9BT22 464 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 RIOX1Q9H6W3 641 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 MUC3AQ02505 3323 aa16.78■□□□□ 0.28
ITGB4-208ENST00000582629 PRRC2BQ5JSZ5 2229 aaKnown RBP16.77■□□□□ 0.28
ITGB4-208ENST00000582629 GTPBP6O43824 516 aaPredicted RBP16.77■□□□□ 0.28
ITGB4-208ENST00000582629 PPFIA4O75335 1185 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 RGS20O76081 388 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 CKBP12277 381 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 POU3F3P20264 500 aaPredicted RBP16.77■□□□□ 0.28
ITGB4-208ENST00000582629 CHMLP26374 656 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 CCND2P30279 289 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 HOXA13P31271 388 aaPredicted RBP16.77■□□□□ 0.28
ITGB4-208ENST00000582629 PTH1RQ03431 593 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 PTK7Q13308 1070 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms