RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TBX21Q9UL17 535 aa22.51■■□□□ 1.19
SREBF1-220ENST00000581707 SOX1O00570 391 aaPredicted RBP22.5■■□□□ 1.19
SREBF1-220ENST00000581707 KPNA6O60684 536 aa22.5■■□□□ 1.19
SREBF1-220ENST00000581707 GH1P01241 217 aa22.5■■□□□ 1.19
SREBF1-220ENST00000581707 CPA1P15085 419 aa22.5■■□□□ 1.19
SREBF1-220ENST00000581707 CCND2P30279 289 aa22.5■■□□□ 1.19
SREBF1-220ENST00000581707 LRIT3Q3SXY7 679 aa22.5■■□□□ 1.19
SREBF1-220ENST00000581707 IL31RAQ8NI17 732 aa22.5■■□□□ 1.19
SREBF1-220ENST00000581707 DDX41Q9UJV9 622 aaKnown RBP22.5■■□□□ 1.19
SREBF1-220ENST00000581707 MRVI1Q9Y6F6 885 aa22.5■■□□□ 1.19
SREBF1-220ENST00000581707 KLF18A0A0U1RQI7 1052 aa22.49■■□□□ 1.19
SREBF1-220ENST00000581707 hCG_1642624A0A1W2PR95 340 aa22.49■■□□□ 1.19
SREBF1-220ENST00000581707 TIMP1P01033 207 aa22.49■■□□□ 1.19
SREBF1-220ENST00000581707 CD4P01730 458 aa22.49■■□□□ 1.19
SREBF1-220ENST00000581707 RTN1Q16799 776 aa22.49■■□□□ 1.19
SREBF1-220ENST00000581707 BLOC1S2Q6QNY1 142 aa22.49■■□□□ 1.19
SREBF1-220ENST00000581707 CUL5Q93034 780 aa22.49■■□□□ 1.19
SREBF1-220ENST00000581707 MTG1Q9BT17 334 aaPredicted RBP22.49■■□□□ 1.19
SREBF1-220ENST00000581707 EPB41L2O43491 1005 aaKnown RBP22.48■■□□□ 1.19
SREBF1-220ENST00000581707 ARHGAP1Q07960 439 aa22.48■■□□□ 1.19
SREBF1-220ENST00000581707 USP17L6PQ6QN14 398 aa22.48■■□□□ 1.19
SREBF1-220ENST00000581707 SMARCC2Q8TAQ2 1214 aa22.48■■□□□ 1.19
SREBF1-220ENST00000581707 AFG1LQ8WV93 481 aa22.48■■□□□ 1.19
SREBF1-220ENST00000581707 LRCH3Q96II8 777 aa22.48■■□□□ 1.19
SREBF1-220ENST00000581707 NAP1L2Q9ULW6 460 aaPredicted RBP22.48■■□□□ 1.19
SREBF1-220ENST00000581707 MYH7BA7E2Y1 1941 aa22.47■■□□□ 1.19
SREBF1-220ENST00000581707 PIK3CDO00329 1044 aa22.47■■□□□ 1.19
SREBF1-220ENST00000581707 RGS20O76081 388 aa22.47■■□□□ 1.19
SREBF1-220ENST00000581707 PSMA5P28066 241 aa22.47■■□□□ 1.19
SREBF1-220ENST00000581707 KCNV1Q6PIU1 500 aa22.47■■□□□ 1.19
SREBF1-220ENST00000581707 Q6ZUG5 572 aa22.47■■□□□ 1.19
SREBF1-220ENST00000581707 PSTPIP2Q9H939 334 aa22.47■■□□□ 1.19
SREBF1-220ENST00000581707 GOLGA8AA7E2F4 631 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 GOLGA8BA8MQT2 603 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 MEIS2O14770 477 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 RCAN1P53805 252 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 FPGSQ05932 587 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 SHHQ15465 462 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 HEATR3Q7Z4Q2 680 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 EMID1Q96A84 441 aaPredicted RBP22.46■■□□□ 1.19
SREBF1-220ENST00000581707 ZFP91Q96JP5 570 aaPredicted RBP22.46■■□□□ 1.19
SREBF1-220ENST00000581707 TRPV6Q9H1D0 765 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 SCN10AQ9Y5Y9 1956 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 FRMPD4Q14CM0 1322 aa22.46■■□□□ 1.19
SREBF1-220ENST00000581707 MMP3P08254 477 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 TGFB3P10600 412 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 CASTP20810 708 aaKnown RBP22.45■■□□□ 1.18
SREBF1-220ENST00000581707 RPS6KB1P23443 525 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 APOBRQ0VD83 1088 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 FUT2Q10981 343 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 LAMC2Q13753 1193 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 NBPF20Q3BBV1 942 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 C9orf50Q5SZB4 431 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 MFSD5Q6N075 450 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 DHX37Q8IY37 1157 aaKnown RBP22.45■■□□□ 1.18
SREBF1-220ENST00000581707 BRF1Q92994 677 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 USP26Q9BXU7 913 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 ALDH8A1Q9H2A2 487 aaPredicted RBP22.45■■□□□ 1.18
SREBF1-220ENST00000581707 FAM217BQ9NTX9 383 aaPredicted RBP22.45■■□□□ 1.18
SREBF1-220ENST00000581707 CNTNAP5Q8WYK1 1306 aa22.45■■□□□ 1.18
SREBF1-220ENST00000581707 B4GALT4O60513 344 aa22.44■■□□□ 1.18
SREBF1-220ENST00000581707 STAM2O75886 525 aa22.44■■□□□ 1.18
SREBF1-220ENST00000581707 EPHB4P54760 987 aa22.44■■□□□ 1.18
SREBF1-220ENST00000581707 MRPS9P82933 396 aaKnown RBP22.44■■□□□ 1.18
SREBF1-220ENST00000581707 FBXL16Q8N461 479 aa22.44■■□□□ 1.18
SREBF1-220ENST00000581707 GPKOWQ92917 476 aaPredicted RBP eCLIP22.44■■□□□ 1.18
SREBF1-220ENST00000581707 PPP1R12CQ9BZL4 782 aa22.44■■□□□ 1.18
SREBF1-220ENST00000581707 V9GY48 417 aaPredicted RBP22.44■■□□□ 1.18
SREBF1-220ENST00000581707 CDC27P30260 824 aa22.43■■□□□ 1.18
SREBF1-220ENST00000581707 DGKDQ16760 1214 aa22.43■■□□□ 1.18
SREBF1-220ENST00000581707 GNPTABQ3T906 1256 aa22.43■■□□□ 1.18
SREBF1-220ENST00000581707 FAM47CQ5HY64 1035 aa22.43■■□□□ 1.18
SREBF1-220ENST00000581707 CELF3Q5SZQ8 465 aaKnown RBP22.43■■□□□ 1.18
SREBF1-220ENST00000581707 NFRKBQ6P4R8 1299 aa22.43■■□□□ 1.18
SREBF1-220ENST00000581707 PPTC7Q8NI37 304 aa22.43■■□□□ 1.18
SREBF1-220ENST00000581707 HIPK3Q9H422 1215 aa22.43■■□□□ 1.18
SREBF1-220ENST00000581707 LAMA2P24043 3122 aaKnown RBP22.42■■□□□ 1.18
SREBF1-220ENST00000581707 CCDC196A0A1B0GTZ2 297 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 SUPT20HL2P0C7V6 817 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 CYP2C18P33260 490 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 ADD1P35611 737 aaKnown RBP22.42■■□□□ 1.18
SREBF1-220ENST00000581707 METAP2P50579 478 aaKnown RBP eCLIP22.42■■□□□ 1.18
SREBF1-220ENST00000581707 CHMP4BP1P59074 171 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 SP2Q02086 613 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 MYSM1Q5VVJ2 828 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 WWC2Q6AWC2 1192 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 XRRA1Q6P2D8 792 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 TMEM199Q8N511 208 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 AGXT2Q9BYV1 514 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 RTEL1Q9NZ71 1219 aa22.42■■□□□ 1.18
SREBF1-220ENST00000581707 SORBS3O60504 671 aa22.41■■□□□ 1.18
SREBF1-220ENST00000581707 GGPS1O95749 300 aa22.41■■□□□ 1.18
SREBF1-220ENST00000581707 UBA1P22314 1058 aaKnown RBP22.41■■□□□ 1.18
SREBF1-220ENST00000581707 PPIGQ13427 754 aaKnown RBP eCLIP22.41■■□□□ 1.181e-9■■■■□ 24
SREBF1-220ENST00000581707 UBE2SQ16763 222 aa22.41■■□□□ 1.18
SREBF1-220ENST00000581707 PCNX4Q63HM2 1172 aa22.41■■□□□ 1.18
SREBF1-220ENST00000581707 GPR153Q6NV75 609 aa22.41■■□□□ 1.18
SREBF1-220ENST00000581707 PPP1R13LQ8WUF5 828 aa22.41■■□□□ 1.18
SREBF1-220ENST00000581707 INPP4AQ96PE3 977 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-220ENST00000581707 TRMT13Q9NUP7 481 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms