RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 MMP3P08254 477 aa24.25■■□□□ 1.47
CCDC42-203ENST00000581598 CCL23P55773 120 aa24.25■■□□□ 1.47
CCDC42-203ENST00000581598 HOMER1Q86YM7 354 aa24.25■■□□□ 1.47
CCDC42-203ENST00000581598 AFG1LQ8WV93 481 aa24.25■■□□□ 1.47
CCDC42-203ENST00000581598 ESYT1Q9BSJ8 1104 aa24.25■■□□□ 1.47
CCDC42-203ENST00000581598 EYSQ5T1H1 3165 aa24.24■■□□□ 1.47
CCDC42-203ENST00000581598 MYH7BA7E2Y1 1941 aa24.24■■□□□ 1.47
CCDC42-203ENST00000581598 DDAH1O94760 285 aa24.24■■□□□ 1.47
CCDC42-203ENST00000581598 SMARCA1P28370 1054 aa24.24■■□□□ 1.47
CCDC42-203ENST00000581598 FAM47CQ5HY64 1035 aa24.24■■□□□ 1.47
CCDC42-203ENST00000581598 KCNV1Q6PIU1 500 aa24.24■■□□□ 1.47
CCDC42-203ENST00000581598 LY9Q9HBG7 655 aa24.24■■□□□ 1.47
CCDC42-203ENST00000581598 GCOM1H8Y6P7 765 aaPredicted RBP24.23■■□□□ 1.47
CCDC42-203ENST00000581598 POLR2MP0CAP2 368 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 CYP2C9P11712 490 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 CASTP20810 708 aaKnown RBP24.23■■□□□ 1.47
CCDC42-203ENST00000581598 VSIG10LQ86VR7 867 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 SESTD1Q86VW0 696 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 TMTC2Q8N394 836 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 TIFAQ96CG3 184 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 VWCEQ96DN2 955 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 MRVI1Q9Y6F6 885 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 TANC1Q9C0D5 1861 aa24.23■■□□□ 1.47
CCDC42-203ENST00000581598 PITPNM1O00562 1244 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 LAMC2Q13753 1193 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 PGM5Q15124 567 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 CASC1Q6TDU7 716 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 ZNF654Q8IZM8 581 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 MYLIPQ8WY64 445 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 TMEM87BQ96K49 555 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 SPZ1Q9BXG8 430 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 PBX4Q9BYU1 374 aa24.22■■□□□ 1.47
CCDC42-203ENST00000581598 CXXC1Q9P0U4 656 aaPredicted RBP24.22■■□□□ 1.47
CCDC42-203ENST00000581598 RGS20O76081 388 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 HOXA13P31271 388 aaPredicted RBP24.21■■□□□ 1.47
CCDC42-203ENST00000581598 MCM5P33992 734 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 RFC2P35250 354 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 NECTIN1Q15223 517 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 DGKDQ16760 1214 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 BMP2KLQ5H9B9 411 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 PPTC7Q8NI37 304 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 CTCFLQ8NI51 663 aaPredicted RBP24.21■■□□□ 1.47
CCDC42-203ENST00000581598 KAT2BQ92831 832 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 SCLYQ96I15 445 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 ZNF576Q9H609 170 aa24.21■■□□□ 1.47
CCDC42-203ENST00000581598 CDH23Q9H251 3354 aa24.2■■□□□ 1.47
CCDC42-203ENST00000581598 SCN5AQ14524 2016 aa24.2■■□□□ 1.47
CCDC42-203ENST00000581598 GBF1Q92538 1859 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 FRMPD4Q14CM0 1322 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 VCANP13611 3396 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 SLC27A2O14975 620 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 PRC1O43663 620 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 TGFB3P10600 412 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 HOXD8P13378 290 aaPredicted RBP24.2■■□□□ 1.46
CCDC42-203ENST00000581598 KIF5BP33176 963 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 LIFRP42702 1097 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 RAB30Q15771 203 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 OTOP2Q7RTS6 562 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 LZTS2Q9BRK4 669 aa24.2■■□□□ 1.46
CCDC42-203ENST00000581598 GRXCR1A8MXD5 290 aa24.19■■□□□ 1.46
CCDC42-203ENST00000581598 SH2B2O14492 632 aaPredicted RBP24.19■■□□□ 1.46
CCDC42-203ENST00000581598 MYCLP12524 364 aaPredicted RBP24.19■■□□□ 1.46
CCDC42-203ENST00000581598 CCND2P30279 289 aa24.19■■□□□ 1.46
CCDC42-203ENST00000581598 GNAQP50148 359 aa24.19■■□□□ 1.46
CCDC42-203ENST00000581598 BFSP2Q13515 415 aa24.19■■□□□ 1.46
CCDC42-203ENST00000581598 DHX37Q8IY37 1157 aaKnown RBP24.19■■□□□ 1.46
CCDC42-203ENST00000581598 MAFAQ8NHW3 353 aaPredicted RBP24.19■■□□□ 1.46
CCDC42-203ENST00000581598 KATNAL1Q9BW62 490 aa24.19■■□□□ 1.46
CCDC42-203ENST00000581598 TRIP12Q14669 1992 aaPredicted RBP24.18■■□□□ 1.46
CCDC42-203ENST00000581598 FOSL2P15408 326 aa24.18■■□□□ 1.46
CCDC42-203ENST00000581598 PBX2P40425 430 aa24.18■■□□□ 1.46
CCDC42-203ENST00000581598 GRIN2CQ14957 1233 aa24.18■■□□□ 1.46
CCDC42-203ENST00000581598 MYSM1Q5VVJ2 828 aa24.18■■□□□ 1.46
CCDC42-203ENST00000581598 CREB3L3Q68CJ9 461 aa24.18■■□□□ 1.46
CCDC42-203ENST00000581598 RETREG2Q8NC44 543 aa24.18■■□□□ 1.46
CCDC42-203ENST00000581598 IL31RAQ8NI17 732 aa24.18■■□□□ 1.46
CCDC42-203ENST00000581598 MSRAQ9UJ68 235 aa24.18■■□□□ 1.46
CCDC42-203ENST00000581598 STAM2O75886 525 aa24.17■■□□□ 1.46
CCDC42-203ENST00000581598 F2P00734 622 aa24.17■■□□□ 1.46
CCDC42-203ENST00000581598 IQCF3P0C7M6 154 aa24.17■■□□□ 1.46
CCDC42-203ENST00000581598 PTGISQ16647 500 aa24.17■■□□□ 1.46
CCDC42-203ENST00000581598 CELF3Q5SZQ8 465 aaKnown RBP24.17■■□□□ 1.46
CCDC42-203ENST00000581598 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.17■■□□□ 1.46
CCDC42-203ENST00000581598 CAGE1Q8TC20 777 aa24.17■■□□□ 1.46
CCDC42-203ENST00000581598 RRP36Q96EU6 259 aaKnown RBP24.17■■□□□ 1.46
CCDC42-203ENST00000581598 CTAGE1Q96RT6 745 aa24.17■■□□□ 1.46
CCDC42-203ENST00000581598 MYL10Q9BUA6 226 aa24.17■■□□□ 1.46
CCDC42-203ENST00000581598 COL25A1Q9BXS0 654 aaPredicted RBP24.17■■□□□ 1.46
CCDC42-203ENST00000581598 NOD1Q9Y239 953 aa24.17■■□□□ 1.46
CCDC42-203ENST00000581598 HAS3O00219 553 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 PPFIA4O75335 1185 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 CALM1P0DP23 149 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 CALM2P0DP24 149 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 CALM3P0DP25 149 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 RBL2Q08999 1139 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 GDF6Q6KF10 455 aaPredicted RBP24.16■■□□□ 1.46
CCDC42-203ENST00000581598 FCHSD1Q86WN1 690 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 CCDC155Q8N6L0 562 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 PPP1R13LQ8WUF5 828 aa24.16■■□□□ 1.46
CCDC42-203ENST00000581598 ANO2Q9NQ90 1003 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms