RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 FGBP02675 491 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 PFKMP08237 780 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 MMP3P08254 477 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 POLR2MP0CAP2 368 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 ACRP10323 421 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 SMARCA1P28370 1054 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 MCM5P33992 734 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 CCL23P55773 120 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 LY6KQ17RY6 165 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 FAM47CQ5HY64 1035 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 ZNF654Q8IZM8 581 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 CTCFLQ8NI51 663 aaPredicted RBP13.37□□□□□ -0.27
SSH2-208ENST00000579040 AFG1LQ8WV93 481 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 TMEM87BQ96K49 555 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 SPZ1Q9BXG8 430 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 LY9Q9HBG7 655 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 DDX41Q9UJV9 622 aaKnown RBP13.37□□□□□ -0.27
SSH2-208ENST00000579040 MRVI1Q9Y6F6 885 aa13.37□□□□□ -0.27
SSH2-208ENST00000579040 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 SLC27A2O14975 620 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 PRC1O43663 620 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 CYP2C9P11712 490 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
SSH2-208ENST00000579040 HOXA13P31271 388 aaPredicted RBP13.36□□□□□ -0.27
SSH2-208ENST00000579040 LAMC2Q13753 1193 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 PGM5Q15124 567 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 DGKDQ16760 1214 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 VSIG10LQ86VR7 867 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 SESTD1Q86VW0 696 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 TIFAQ96CG3 184 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 TET1Q8NFU7 2136 aa13.36□□□□□ -0.27
SSH2-208ENST00000579040 CALM1P0DP23 149 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 CALM2P0DP24 149 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 CALM3P0DP25 149 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 TGFB3P10600 412 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 MYCLP12524 364 aaPredicted RBP13.35□□□□□ -0.27
SSH2-208ENST00000579040 CCND2P30279 289 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 RFC2P35250 354 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 LIFRP42702 1097 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 GNAQP50148 359 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 BFSP2Q13515 415 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 NECTIN1Q15223 517 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 RAB30Q15771 203 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 CREB3L3Q68CJ9 461 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 RRP36Q96EU6 259 aaKnown RBP13.35□□□□□ -0.27
SSH2-208ENST00000579040 KATNAL1Q9BW62 490 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 FRMPD4Q14CM0 1322 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 CUL9Q8IWT3 2517 aa13.35□□□□□ -0.27
SSH2-208ENST00000579040 DOCK5Q9H7D0 1870 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 SH2B2O14492 632 aaPredicted RBP13.34□□□□□ -0.27
SSH2-208ENST00000579040 STAM2O75886 525 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 RGS20O76081 388 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 HOXD8P13378 290 aaPredicted RBP13.34□□□□□ -0.27
SSH2-208ENST00000579040 RNF20Q5VTR2 975 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 NFXL1Q6ZNB6 911 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 FCHSD1Q86WN1 690 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 DHX37Q8IY37 1157 aaKnown RBP13.34□□□□□ -0.27
SSH2-208ENST00000579040 CCDC155Q8N6L0 562 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 RETREG2Q8NC44 543 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 IL31RAQ8NI17 732 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 MYLIPQ8WY64 445 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 KAT2BQ92831 832 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 SCLYQ96I15 445 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 PBX4Q9BYU1 374 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 ZNF576Q9H609 170 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 CXXC1Q9P0U4 656 aaPredicted RBP13.34□□□□□ -0.27
SSH2-208ENST00000579040 SEC63Q9UGP8 760 aaKnown RBP13.34□□□□□ -0.27
SSH2-208ENST00000579040 MSRAQ9UJ68 235 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 NOD1Q9Y239 953 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 KAT6AQ92794 2004 aa13.34□□□□□ -0.27
SSH2-208ENST00000579040 F2P00734 622 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 FOSL2P15408 326 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 PTGISQ16647 500 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 CELF3Q5SZQ8 465 aaKnown RBP13.33□□□□□ -0.28
SSH2-208ENST00000579040 MYSM1Q5VVJ2 828 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 OTOP2Q7RTS6 562 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 MAFAQ8NHW3 353 aaPredicted RBP13.33□□□□□ -0.28
SSH2-208ENST00000579040 CAGE1Q8TC20 777 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 VWCEQ96DN2 955 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 SLC4A7Q9Y6M7 1214 aa13.33□□□□□ -0.28
SSH2-208ENST00000579040 GRXCR1A8MXD5 290 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 HAS3O00219 553 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 PIK3CDO00329 1044 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 PPFIA4O75335 1185 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 GGPS1O95749 300 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 IQCF3P0C7M6 154 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 ACTN1P12814 892 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 UBA1P22314 1058 aaKnown RBP13.32□□□□□ -0.28
SSH2-208ENST00000579040 PSEN2P49810 448 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 CHMP4BP1P59074 171 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 RBL2Q08999 1139 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 GNPTABQ3T906 1256 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 XRRA1Q6P2D8 792 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 PIBF1Q8WXW3 757 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms