RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 CCDC62Q6P9F0 684 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 CWC27Q6UX04 472 aaKnown RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 PLEKHM2Q8IWE5 1019 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 STAG2Q8N3U4 1231 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 RETREG2Q8NC44 543 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 PNMA1Q8ND90 353 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 IL27Q8NEV9 243 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 DNERQ8NFT8 737 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 EXOC6Q8TAG9 804 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 SYTL5Q8TDW5 730 aaPredicted RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 ADAMTS19Q8TE59 1207 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 SCFD2Q8WU76 684 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 AFG1LQ8WV93 481 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 ATXN2LQ8WWM7 1075 aaKnown RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 PIBF1Q8WXW3 757 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 ARNTL2Q8WYA1 636 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 MTIF3Q9H2K0 278 aaKnown RBP4.5□□□□□ -1.69
NUP85-209ENST00000578987 THEGQ9P2T0 379 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 HDAC6Q9UBN7 1215 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 PCDHA11Q9Y5I1 949 aa4.5□□□□□ -1.69
NUP85-209ENST00000578987 LCHNA4D1U4 455 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 A6NJR5 290 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 CFBP00751 764 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 GH1P01241 217 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 MMP3P08254 477 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 ZNF286BP0CG31 522 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 SNHG28P0DPA3 235 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 BMP1P13497 986 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 EIF2AK2P19525 551 aaKnown RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 CASTP20810 708 aaKnown RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 EDNRBP24530 442 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 HOXA13P31271 388 aaPredicted RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 DEFB103AP81534 67 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 TAP1Q03518 808 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 ARHGAP1Q07960 439 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 HDAC1Q13547 482 aaPredicted RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 AAMPQ13685 434 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 HIC1Q14526 733 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 CDC37Q16543 378 aaPredicted RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 QRICH1Q2TAL8 776 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 ARHGEF16Q5VV41 709 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 NFRKBQ6P4R8 1299 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 CYB5R4Q7L1T6 521 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 CHD1LQ86WJ1 897 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 FBXO11Q86XK2 927 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 DHX37Q8IY37 1157 aaKnown RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 ENAHQ8N8S7 591 aaPredicted RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 DHX38Q92620 1227 aaKnown RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 ESR2Q92731 530 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 KAT2BQ92831 832 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 GPKOWQ92917 476 aaPredicted RBP eCLIP4.49□□□□□ -1.69
NUP85-209ENST00000578987 WNT8BQ93098 351 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 CTAGE1Q96RT6 745 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 UHRF1Q96T88 793 aaPredicted RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 RMDN3Q96TC7 470 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 ZBED2Q9BTP6 218 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 OSBPL7Q9BZF2 842 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 IL25Q9H293 177 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 KAT14Q9H8E8 782 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 JMJD4Q9H9V9 463 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 SENP2Q9HC62 589 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 MTUS1Q9ULD2 1270 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 NOD1Q9Y239 953 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 SUPT16HQ9Y5B9 1047 aaKnown RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 MTCH2Q9Y6C9 303 aa4.49□□□□□ -1.69
NUP85-209ENST00000578987 MYH9P35579 1960 aaKnown RBP4.49□□□□□ -1.69
NUP85-209ENST00000578987 MYO7AQ13402 2215 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 B4DLN1 442 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 KIF28PB7ZC32 967 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 KLRF2D3W0D1 207 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 OPLAHO14841 1288 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 NKRFO15226 690 aaKnown RBP eCLIP4.48□□□□□ -1.69
NUP85-209ENST00000578987 TLL1O43897 1013 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 KPNA6O60684 536 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 PPP1R11O60927 126 aaPredicted RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 NBNO60934 754 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 NR3C2P08235 984 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 PARP1P09874 1014 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 CKBP12277 381 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 ACTN1P12814 892 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 PSEN2P49810 448 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 MRPL12P52815 198 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 MFAP1P55081 439 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 WDR5P61964 334 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 SP2Q02086 613 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 PTH1RQ03431 593 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 GRB10Q13322 594 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 BFSP2Q13515 415 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 MFSD10Q14728 455 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 STXBP2Q15833 593 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 KIAA0753Q2KHM9 967 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 SLC35G1Q2M3R5 365 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 HSDL1Q3SXM5 330 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 BRDTQ58F21 947 aaPredicted RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 GPATCH4Q5T3I0 446 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 ZNF618Q5T7W0 954 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.48□□□□□ -1.69
NUP85-209ENST00000578987 FCHSD1Q86WN1 690 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 IQCA1Q86XH1 822 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 DGKHQ86XP1 1220 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms