RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
ERBB2-208ENST00000578630 FAM184AQ8NB25 1140 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 ALG1Q9BT22 464 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 PCDHA4Q9UN74 947 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
ERBB2-208ENST00000578630 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 MAFGO15525 162 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 ZEB2O60315 1214 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 FARP2O94887 1054 aaPredicted RBP13.18□□□□□ -0.3
ERBB2-208ENST00000578630 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
ERBB2-208ENST00000578630 SMPD1P17405 629 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 ZNF76P36508 570 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
ERBB2-208ENST00000578630 RGS19P49795 217 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
ERBB2-208ENST00000578630 NECAB2Q7Z6G3 386 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 BLIDQ8IZY5 108 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 BRMS1Q9HCU9 246 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 RTEL1Q9NZ71 1219 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
ERBB2-208ENST00000578630 KIF3AQ9Y496 699 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 MRVI1Q9Y6F6 885 aa13.18□□□□□ -0.3
ERBB2-208ENST00000578630 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-208ENST00000578630 DNM1LO00429 736 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 JAK2O60674 1132 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 PGK1P00558 417 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 GJA9P57773 515 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 PCSK9Q8NBP7 692 aaKnown RBP13.17□□□□□ -0.3
ERBB2-208ENST00000578630 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 AIFM3Q96NN9 605 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
ERBB2-208ENST00000578630 ANO3Q9BYT9 981 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 TMEM260Q9NX78 707 aa13.17□□□□□ -0.3
ERBB2-208ENST00000578630 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-208ENST00000578630 FRMPD4Q14CM0 1322 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 HTTP42858 3142 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 C6orf222P0C671 652 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-208ENST00000578630 ICAM3P32942 547 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
ERBB2-208ENST00000578630 LRRC41Q15345 812 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
ERBB2-208ENST00000578630 GJC2Q5T442 439 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-208ENST00000578630 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 TLK2Q86UE8 772 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 IL31RAQ8NI17 732 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 SHISA4Q96DD7 197 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 PAWRQ96IZ0 340 aaKnown RBP13.16□□□□□ -0.3
ERBB2-208ENST00000578630 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
ERBB2-208ENST00000578630 KCNJ14Q9UNX9 436 aa13.16□□□□□ -0.3
ERBB2-208ENST00000578630 SPATA31C2B4DYI2 1134 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 FIBPO43427 364 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 DTNBO60941 627 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.3
ERBB2-208ENST00000578630 GH1P01241 217 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 CYP3A4P08684 503 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 SREBF1P36956 1147 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 CPT1AP50416 773 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 USP11P51784 963 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 NKX3-2P78367 333 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 ST3GAL1Q11201 340 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 NEDD9Q14511 834 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
ERBB2-208ENST00000578630 GIMAP8Q8ND71 665 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-208ENST00000578630 KLHDC9Q8NEP7 349 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 VTI1AQ96AJ9 217 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 GPRASP2Q96D09 838 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-208ENST00000578630 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 C8orf76Q96K31 380 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 INPP4AQ96PE3 977 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-208ENST00000578630 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 HTATIP2Q9BUP3 242 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 SENP6Q9GZR1 1112 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-208ENST00000578630 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.3
ERBB2-208ENST00000578630 C11orf49Q9H6J7 331 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 MLXIPQ9HAP2 919 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 JADE2Q9NQC1 790 aa13.15□□□□□ -0.3
ERBB2-208ENST00000578630 CENPFP49454 3210 aa13.15□□□□□ -0.31
ERBB2-208ENST00000578630 SYNRGQ9UMZ2 1314 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 CCDC194A0A1B0GVG4 234 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 MOXD2PA6NHM9 499 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 ADCY6O43306 1168 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 KPNA6O60684 536 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 ADAMTS4O75173 837 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 RGS20O76081 388 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-208ENST00000578630 KRT2P35908 639 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 KCNA10Q16322 511 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 FSCN1Q16658 493 aaKnown RBP13.14□□□□□ -0.31
ERBB2-208ENST00000578630 CEP55Q53EZ4 464 aa13.14□□□□□ -0.31
ERBB2-208ENST00000578630 KRT40Q6A162 431 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms