RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PXMP2Q9NR77 195 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 COL20A1Q9P218 1284 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 LOC102724159A0A0B4J2E5 919 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 FAM237AA0A1B0GTK4 181 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 B4DLN1 442 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 STRNO43815 780 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 TDP2O95551 362 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 SETQ01105 290 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-202ENST00000578430 PWP2Q15269 919 aaKnown RBP15.2■□□□□ 0.02
SRSF1-202ENST00000578430 TAF1CQ15572 869 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-202ENST00000578430 Q3C1V9 767 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 CCDC73Q6ZRK6 1079 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 CCAR1Q8IX12 1150 aaKnown RBP15.2■□□□□ 0.02
SRSF1-202ENST00000578430 SLFN12Q8IYM2 578 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 ABRAQ8N0Z2 381 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 GPT2Q8TD30 523 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 SYAP1Q96A49 352 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-202ENST00000578430 AK8Q96MA6 479 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 FAM20AQ96MK3 541 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 MTMR9Q96QG7 549 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 TAAR1Q96RJ0 339 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 IWS1Q96ST2 819 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 RAB34Q9BZG1 259 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 ZFYVE28Q9HCC9 887 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 FAM13BQ9NYF5 915 aa15.2■□□□□ 0.02
SRSF1-202ENST00000578430 ADD3Q9UEY8 706 aaKnown RBP15.2■□□□□ 0.02
SRSF1-202ENST00000578430 ADGRA2Q96PE1 1338 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 STAM2O75886 525 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 BCRP11274 1271 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 FCER1AP12319 257 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 KCTD2Q14681 263 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 TMEM266Q2M3C6 531 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 RESP18Q5W5W9 173 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
SRSF1-202ENST00000578430 PDCD2LQ9BRP1 358 aa15.19■□□□□ 0.02
SRSF1-202ENST00000578430 MEIS1O00470 390 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 SLC37A4O43826 429 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 MARCH6O60337 910 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 TLR2O60603 784 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 AOC2O75106 756 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 CCND2P30279 289 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 MAPK4P31152 587 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
SRSF1-202ENST00000578430 FAM160A1Q05DH4 1040 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 PDIA5Q14554 519 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 PGM5Q15124 567 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 SHC4Q6S5L8 630 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 MMP19Q99542 508 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 MXRA8Q9BRK3 442 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 PYM1Q9BRP8 204 aaKnown RBP15.18■□□□□ 0.02
SRSF1-202ENST00000578430 CSRNP2Q9H175 543 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 KCNMB3Q9NPA1 279 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 DDX19AQ9NUU7 478 aaKnown RBP15.18■□□□□ 0.02
SRSF1-202ENST00000578430 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
SRSF1-202ENST00000578430 DNAJC25-GNG10A0A024R161 153 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 IGLV3-22A0A075B6J6 115 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 VWA3AA6NCI4 1184 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 FAM86B1E9PN63 330 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 CA12O43570 354 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 PEX10O60683 326 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 FAM86B2P0C5J1 330 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 EIF2AK2P19525 551 aaKnown RBP15.17■□□□□ 0.02
SRSF1-202ENST00000578430 PRR16Q569H4 304 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 VSIG10LQ86VR7 867 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 FAM133AQ8N9E0 248 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 LENG9Q96B70 501 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 CLIC6Q96NY7 704 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 BEGAINQ9BUH8 593 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 HPSEQ9Y251 543 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 UBIAD1Q9Y5Z9 338 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 STK24Q9Y6E0 443 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 MRVI1Q9Y6F6 885 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 IVNS1ABPQ9Y6Y0 642 aa15.17■□□□□ 0.02
SRSF1-202ENST00000578430 CASP8AP2Q9UKL3 1982 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 MAFGO15525 162 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 SLC26A4O43511 780 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 NR3C2P08235 984 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 PFKFB1P16118 471 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 LIG1P18858 919 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 TXLNAP40222 546 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 C17orf99Q6UX52 265 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 PLA2G4DQ86XP0 818 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 IGSF22Q8N9C0 903 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 ENGASEQ8NFI3 743 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 ETNPPLQ8TBG4 499 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 HAS1Q92839 578 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 PORCNQ9H237 461 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 JADE2Q9NQC1 790 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 PCDHA12Q9UN75 941 aa15.16■□□□□ 0.02
SRSF1-202ENST00000578430 MAP2K2P36507 400 aa15.15■□□□□ 0.02
SRSF1-202ENST00000578430 TXKP42681 527 aa15.15■□□□□ 0.02
SRSF1-202ENST00000578430 ALDH5A1P51649 535 aaPredicted RBP15.15■□□□□ 0.02
SRSF1-202ENST00000578430 UBXN2AP68543 259 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms