RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 ALDH8A1Q9H2A2 487 aaPredicted RBP11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 COL20A1Q9P218 1284 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 SCN5AQ14524 2016 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 PPP1R11O60927 126 aaPredicted RBP11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 CD4P01730 458 aa11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 PFKMP08237 780 aa11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 MYCLP12524 364 aaPredicted RBP11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 CASTP20810 708 aaKnown RBP11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 HOXA13P31271 388 aaPredicted RBP11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 BFSP2Q13515 415 aa11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 LAMC2Q13753 1193 aa11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 PGM5Q15124 567 aa11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 SHHQ15465 462 aa11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 EMID1Q96A84 441 aaPredicted RBP11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 MYL10Q9BUA6 226 aa11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 SENP2Q9HC62 589 aa11.73□□□□□ -0.53
SUPT6H-204ENST00000577939 FRMPD4Q14CM0 1322 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 hCG_1984214I3L0E3 225 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 OPLAHO14841 1288 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 ZBTB43O43298 467 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 CYTH3O43739 400 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 B4GALT4O60513 344 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 ARIH2O95376 493 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 MMP3P08254 477 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 TGFB3P10600 412 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 RCAN1P53805 252 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 PSMC6P62333 389 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 ARHGAP1Q07960 439 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 RTN1Q16799 776 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 C9orf50Q5SZB4 431 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 XRRA1Q6P2D8 792 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 TMTC3Q6ZXV5 915 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 DHX32Q7L7V1 743 aaKnown RBP11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 FCHSD1Q86WN1 690 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 RPUSD2Q8IZ73 545 aaKnown RBP11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 ZNF713Q8N859 430 aaPredicted RBP11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 PIBF1Q8WXW3 757 aa11.72□□□□□ -0.53
SUPT6H-204ENST00000577939 CCDC196A0A1B0GTZ2 297 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 SPDYE3A6NKU9 549 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 GOLGA8AA7E2F4 631 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 GOLGA8BA8MQT2 603 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 PIK3CDO00329 1044 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 NOP56O00567 594 aaKnown RBP11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 CENPBP07199 599 aaPredicted RBP11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 RFC2P35250 354 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 LY6KQ17RY6 165 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 TSGA10IPQ3SY00 556 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 APOA5Q6Q788 366 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 AFG1LQ8WV93 481 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 TBC1D5Q92609 795 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 COPS5Q92905 334 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 CDHR1Q96JP9 859 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 NOC4LQ9BVI4 516 aaKnown RBP11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 GLT8D2Q9H1C3 349 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 IL23AQ9NPF7 189 aa11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 NAP1L2Q9ULW6 460 aaPredicted RBP11.71□□□□□ -0.53
SUPT6H-204ENST00000577939 FIBPO43427 364 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 EPB41L2O43491 1005 aaKnown RBP11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 EIF5BO60841 1220 aaKnown RBP11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 PARNO95453 639 aaKnown RBP11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 ACTN1P12814 892 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 CSF2RAP15509 400 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 PTGS1P23219 599 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 ITGB8P26012 769 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 PSMA5P28066 241 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 CYP2C18P33260 490 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 CHMP4BP1P59074 171 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 NEDD9Q14511 834 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 NBPF20Q3BBV1 942 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 ERICH6BQ5W0A0 696 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 HEATR3Q7Z4Q2 680 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 NLRX1Q86UT6 975 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 VSIG10LQ86VR7 867 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 C7orf31Q8N865 590 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 RETREG2Q8NC44 543 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 GIMAP8Q8ND71 665 aaPredicted RBP11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 CAGE1Q8TC20 777 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 SPATA33Q96N06 139 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 LRRC2Q9BYS8 371 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 TRPV6Q9H1D0 765 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 DDX41Q9UJV9 622 aaKnown RBP11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 STXBP5LQ9Y2K9 1186 aa11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
SUPT6H-204ENST00000577939 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
SUPT6H-204ENST00000577939 CNTNAP5Q8WYK1 1306 aa11.69□□□□□ -0.54
SUPT6H-204ENST00000577939 KLF18A0A0U1RQI7 1052 aa11.69□□□□□ -0.54
SUPT6H-204ENST00000577939 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.69□□□□□ -0.54
SUPT6H-204ENST00000577939 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.69□□□□□ -0.54
SUPT6H-204ENST00000577939 GGPS1O95749 300 aa11.69□□□□□ -0.54
SUPT6H-204ENST00000577939 F2P00734 622 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms