RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 PPP2R5BQ15173 497 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 SPRED2Q7Z698 418 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 CCDC144CPQ8IYA2 1237 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 GJD3Q8N144 294 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 SMARCC2Q8TAQ2 1214 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 VWCEQ96DN2 955 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 AGBL1Q96MI9 1066 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 SLC9A7Q96T83 725 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 NUP88Q99567 741 aaPredicted RBP16.15■□□□□ 0.18
SREBF1-217ENST00000577897 SLF1Q9BQI6 1058 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 UBAC1Q9BSL1 405 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 LRRC2Q9BYS8 371 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 ASTN1O14525 1302 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 GRIN2DO15399 1336 aa16.15■□□□□ 0.18
SREBF1-217ENST00000577897 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 MINDY4BA8MYZ0 360 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 IFIT3O14879 490 aaKnown RBP16.14■□□□□ 0.17
SREBF1-217ENST00000577897 PRPF40AO75400 957 aaKnown RBP16.14■□□□□ 0.17
SREBF1-217ENST00000577897 PFKMP08237 780 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 ACTN1P12814 892 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 PTGS1P23219 599 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 RCAN1P53805 252 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 KRT85P78386 507 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 PDE4BQ07343 736 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 FSCN1Q16658 493 aaKnown RBP16.14■□□□□ 0.17
SREBF1-217ENST00000577897 CCDC178Q5BJE1 867 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 FOXD4L5Q5VV16 416 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-217ENST00000577897 IQCA1Q86XH1 822 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 FOXD4L4Q8WXT5 416 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-217ENST00000577897 FGD4Q96M96 766 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 EPB41L4AQ9HCS5 686 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-217ENST00000577897 C5orf42Q9H799 3197 aa16.14■□□□□ 0.17
SREBF1-217ENST00000577897 B4E1Z4 1266 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 KIF28PB7ZC32 967 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 ZEB2O60315 1214 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 CYP2C9P11712 490 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
SREBF1-217ENST00000577897 SBK1Q52WX2 424 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 ATL3Q6DD88 541 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 TBC1D10CQ8IV04 446 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 GDPD5Q8WTR4 605 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 AP5M1Q9H0R1 490 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 RAVER2Q9HCJ3 691 aaKnown RBP16.13■□□□□ 0.17
SREBF1-217ENST00000577897 MTMR6Q9Y217 621 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 SLC12A7Q9Y666 1083 aa16.13■□□□□ 0.17
SREBF1-217ENST00000577897 CYP2D7A0A087X1C5 515 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-217ENST00000577897 DYNC1LI2O43237 492 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-217ENST00000577897 ZBTB43O43298 467 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 LPXNO60711 386 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 ALADP13716 330 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 CDK8P49336 464 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 WTAPQ15007 396 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 RRP12Q5JTH9 1297 aaKnown RBP16.12■□□□□ 0.17
SREBF1-217ENST00000577897 CHST3Q7LGC8 479 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 HERC6Q8IVU3 1022 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 FAM178BQ8IXR5 827 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 TMEM87AQ8NBN3 555 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 WASF1Q92558 559 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 SCAND2PQ9GZW5 306 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-217ENST00000577897 KATNBL1Q9H079 304 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 UBE2ZQ9H832 354 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-217ENST00000577897 KANSL2Q9H9L4 492 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 LMBRD1Q9NUN5 540 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 TRMT13Q9NUP7 481 aaKnown RBP16.12■□□□□ 0.17
SREBF1-217ENST00000577897 SCN5AQ14524 2016 aa16.12■□□□□ 0.17
SREBF1-217ENST00000577897 PRKAB2O43741 272 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 ZBED4O75132 1171 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 KDM4AO75164 1064 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 IL9P15248 144 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 NKX3-2P78367 333 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 CCT2P78371 535 aaKnown RBP16.11■□□□□ 0.17
SREBF1-217ENST00000577897 FOXK2Q01167 660 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 CTDSPL2Q05D32 466 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 NSUN7Q8NE18 718 aaKnown RBP16.11■□□□□ 0.17
SREBF1-217ENST00000577897 SEZ6LQ9BYH1 1024 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 FTOQ9C0B1 505 aaKnown RBP eCLIP16.11■□□□□ 0.17
SREBF1-217ENST00000577897 HOMER2Q9NSB8 354 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 CFAP45Q9UL16 551 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 GNEQ9Y223 722 aaKnown RBP16.11■□□□□ 0.17
SREBF1-217ENST00000577897 ZNF536O15090 1300 aa16.11■□□□□ 0.17
SREBF1-217ENST00000577897 GOLGA6L3A6NEY3 463 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 CALM1P0DP23 149 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 CALM2P0DP24 149 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 CALM3P0DP25 149 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 KCNA5P22460 613 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 ANTXR2P58335 489 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 CNTN2Q02246 1040 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 ST3GAL1Q11201 340 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 PHOSPHO2Q8TCD6 241 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 KIFC2Q96AC6 838 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 FBXO40Q9UH90 709 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 MTUS1Q9ULD2 1270 aa16.1■□□□□ 0.17
SREBF1-217ENST00000577897 BAZ2AQ9UIF9 1905 aaKnown RBP16.09■□□□□ 0.17
SREBF1-217ENST00000577897 GOLGA8AA7E2F4 631 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms