RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	MRPS9	P82933	396 aa	Known RBP	11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	PWP2	Q15269	919 aa	Known RBP	11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	STXBP2	Q15833	593 aa		11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	LETM2	Q2VYF4	491 aa		11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	PRAMEF19	Q5SWL8	479 aa		11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	FAM173B	Q6P4H8	233 aa		11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	CTU1	Q7Z7A3	348 aa	Known RBP	11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	NEK8	Q86SG6	692 aa		11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	MSL3	Q8N5Y2	521 aa	Known RBP	11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	MPHOSPH6	Q99547	160 aa	Known RBP	11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	MYH15	Q9Y2K3	1946 aa		11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	SYNGAP1	Q96PV0	1343 aa		11.33	□□□□□ -0.6
SPOP-222	ENST00000577134	FAM86B1	E9PN63	330 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	EIF3J	O75822	258 aa	Known RBP	11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	FAM86B2	P0C5J1	330 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	TOB1	P50616	345 aa	Predicted RBP	11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	NUCB2	P80303	420 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	TRIM32	Q13049	653 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	NBR1	Q14596	966 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	XRRA1	Q6P2D8	792 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	SEPT14	Q6ZU15	432 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	BRAP	Q7Z569	592 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	FBXO16	Q8IX29	292 aa	Predicted RBP	11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	TRMT44	Q8IYL2	757 aa	Known RBP	11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	CYP2W1	Q8TAV3	490 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	PXYLP1	Q8TE99	480 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	NOL7	Q9UMY1	257 aa	Known RBP	11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	UBIAD1	Q9Y5Z9	338 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	KIAA1217	Q5T5P2	1943 aa		11.32	□□□□□ -0.6
SPOP-222	ENST00000577134	CEP350	Q5VT06	3117 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	CCNT1	O60563	726 aa	Known RBP	11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	RGS20	O76081	388 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	TDP2	O95551	362 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	ITGB5	P18084	799 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	CIITA	P33076	1130 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	ZNF174	Q15697	407 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	CEP55	Q53EZ4	464 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	TTC38	Q5R3I4	469 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	MYSM1	Q5VVJ2	828 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	MFSD14C	Q5VZR4	134 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	MXRA8	Q9BRK3	442 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	WDR11	Q9BZH6	1224 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	KATNBL1	Q9H079	304 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	PDGFC	Q9NRA1	345 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	CHMP5	Q9NZZ3	219 aa		11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.31	□□□□□ -0.6
SPOP-222	ENST00000577134	IGLV3-22	A0A075B6J6	115 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	MEIS1	O00470	390 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	SLC37A4	O43826	429 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	STAM2	O75886	525 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	HMGCR	P04035	888 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	AR	P10275	920 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	CYP3A7	P24462	503 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	GRK4	P32298	578 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	MCM7	P33993	719 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	TRAPPC10	P48553	1259 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	CACNB2	Q08289	660 aa	Predicted RBP	11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	ACVR2B	Q13705	512 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	PRR16	Q569H4	304 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	RILPL1	Q5EBL4	403 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	TAPT1	Q6NXT6	567 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	NLRX1	Q86UT6	975 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	PLA2G4D	Q86XP0	818 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	SLAIN1	Q8ND83	568 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	TRPV1	Q8NER1	839 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	SH3TC2	Q8TF17	1288 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	LENG9	Q96B70	501 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	INPP4A	Q96PE3	977 aa	Predicted RBP	11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	UIMC1	Q96RL1	719 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	ABHD16B	Q9H3Z7	469 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	VTA1	Q9NP79	307 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	JADE2	Q9NQC1	790 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	PRDM10	Q9NQV6	1147 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	CNPY2	Q9Y2B0	182 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	PCDHB6	Q9Y5E3	794 aa		11.3	□□□□□ -0.6
SPOP-222	ENST00000577134	INHA	P05111	366 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	CYBA	P13498	195 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	PRKAR2A	P13861	404 aa	Known RBP	11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	SEMA3F	Q13275	785 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	MTMR1	Q13613	665 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134		Q4G0T1	1027 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	TMEM63B	Q5T3F8	832 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	PPP4R3A	Q6IN85	833 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	MOXD1	Q6UVY6	613 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	GPRASP2	Q96D09	838 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	CHAMP1	Q96JM3	812 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	MBOAT7	Q96N66	472 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	NAP1L4	Q99733	375 aa	Known RBP	11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	PKD2L1	Q9P0L9	805 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	DDX25	Q9UHL0	483 aa	Known RBP	11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	CLIC4	Q9Y696	253 aa		11.29	□□□□□ -0.6
SPOP-222	ENST00000577134	DOCK5	Q9H7D0	1870 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms