RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 PLA2G4BP0C869 781 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 CYP2J2P51589 502 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 SPA17Q15506 151 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 AXDND1Q5T1B0 1012 aaPredicted RBP9.31□□□□□ -0.92
NCBP3-205ENST00000575815 IGSF22Q8N9C0 903 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 HPS3Q969F9 1004 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 GSDMAQ96QA5 445 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 SAMSN1Q9NSI8 373 aaKnown RBP9.31□□□□□ -0.92
NCBP3-205ENST00000575815 PUF60Q9UHX1 559 aaKnown RBP9.31□□□□□ -0.92
NCBP3-205ENST00000575815 NWD2Q9ULI1 1742 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 PHACTR2O75167 634 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 RPS6P62753 249 aaKnown RBP9.31□□□□□ -0.92
NCBP3-205ENST00000575815 CEP55Q53EZ4 464 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 PNMA8AQ86V59 439 aaPredicted RBP9.31□□□□□ -0.92
NCBP3-205ENST00000575815 DHX37Q8IY37 1157 aaKnown RBP9.31□□□□□ -0.92
NCBP3-205ENST00000575815 MYOCDQ8IZQ8 938 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 TIGD1Q96MW7 591 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 WDR11Q9BZH6 1224 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 RIOX1Q9H6W3 641 aa9.31□□□□□ -0.92
NCBP3-205ENST00000575815 C4BP0C0L5 1744 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 C19orf81C9J6K1 198 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 NFIBO00712 420 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 EXOC3O60645 756 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 ZNF157P51786 506 aaPredicted RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 GABPAQ06546 454 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 RBM46Q8TBY0 533 aaKnown RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 CAGE1Q8TC20 777 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 NSUN6Q8TEA1 469 aaKnown RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 CEP170P1Q96L14 293 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 IFT74Q96LB3 600 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 ACAD9Q9H845 621 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 SEPT9Q9UHD8 586 aaPredicted RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 PNMA2Q9UL42 364 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 TOGARAM1Q9Y4F4 1720 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 TAF1P21675 1872 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 RPL13P26373 211 aaKnown RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 PPP1R16BQ96T49 567 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 NRBP1Q9UHY1 535 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 SLC37A4O43826 429 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 CCND2P30279 289 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 LRMPQ12912 555 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 RAPGEF1Q13905 1077 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 MTERF2Q49AM1 385 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 CYP2W1Q8TAV3 490 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 DDX12PQ92771 950 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 DNAJC18Q9H819 358 aa9.3□□□□□ -0.92
NCBP3-205ENST00000575815 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 FAM207AQ9NSI2 230 aaPredicted RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 LARSQ9P2J5 1176 aaKnown RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 MKRN1Q9UHC7 482 aaKnown RBP9.3□□□□□ -0.92
NCBP3-205ENST00000575815 TNNT1P13805 278 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 MORC3Q14149 939 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 PTPAQ15257 358 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 ODF2Q5BJF6 829 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 FAM47CQ5HY64 1035 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 PDXDC2PQ6P474 469 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 OTUD6AQ7L8S5 288 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 CNKSR2Q8WXI2 1034 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 ZNF668Q96K58 619 aaPredicted RBP9.29□□□□□ -0.92
NCBP3-205ENST00000575815 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 FRMD4BQ9Y2L6 1034 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 CCL15-CCL14A0A0B4J2E2 113 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 FSD2A1L4K1 749 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 LRRIQ4A6NIV6 560 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 ADKP55263 362 aaKnown RBP9.29□□□□□ -0.92
NCBP3-205ENST00000575815 GOLGA8FQ08AF8 430 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 GOLGA8DPQ0D2H9 430 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 CCL15Q16663 113 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 FKBP1CQ5VVH2 108 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 PPP1R18Q6NYC8 613 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 ZNF579Q8NAF0 562 aaKnown RBP9.29□□□□□ -0.92
NCBP3-205ENST00000575815 DYDC2Q96IM9 177 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 TAAR1Q96RJ0 339 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 LUC7L2Q9Y383 392 aaKnown RBP9.29□□□□□ -0.92
NCBP3-205ENST00000575815 COL22A1Q8NFW1 1626 aaPredicted RBP9.29□□□□□ -0.92
NCBP3-205ENST00000575815 CLIC2O15247 247 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 URI1O94763 535 aaPredicted RBP9.29□□□□□ -0.92
NCBP3-205ENST00000575815 KCNA3P22001 575 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 METTL16Q86W50 562 aaKnown RBP9.29□□□□□ -0.92
NCBP3-205ENST00000575815 GMCL1Q96IK5 515 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 BEGAINQ9BUH8 593 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.29□□□□□ -0.92
NCBP3-205ENST00000575815 COL4A3BPQ9Y5P4 624 aa9.29□□□□□ -0.92
NCBP3-205ENST00000575815 K7ENM7 598 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 DKC1O60832 514 aaKnown RBP eCLIP9.28□□□□□ -0.927e-13■■■■■ 37.1
NCBP3-205ENST00000575815 USP11P51784 963 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 POLGP54098 1239 aaPredicted RBP9.28□□□□□ -0.92
NCBP3-205ENST00000575815 STXBP2Q15833 593 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 CCDC112Q8NEF3 446 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 ANKS1AQ92625 1134 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 CCDC127Q96BQ5 260 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 CLMNQ96JQ2 1002 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 NACC1Q96RE7 527 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 NLRC4Q9NPP4 1024 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 LUC7LQ9NQ29 371 aaKnown RBP9.28□□□□□ -0.92
NCBP3-205ENST00000575815 ZKSCAN5Q9Y2L8 839 aa9.28□□□□□ -0.92
NCBP3-205ENST00000575815 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.28□□□□□ -0.923e-8■■■□□ 18.1
NCBP3-205ENST00000575815 CICQ96RK0 1608 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms