RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 CEP68Q76N32 757 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 LDHDQ86WU2 507 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 IGDCC3Q8IVU1 814 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 JMYQ8N9B5 988 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 MZB1Q8WU39 189 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 TSPAN17Q96FV3 270 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 PHF20Q9BVI0 1012 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 CDIP1Q9H305 208 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 SMG5Q9UPR3 1016 aaKnown RBP7.07□□□□□ -1.28
CDC27-215ENST00000573550 X6R8D5 127 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 CEP162Q5TB80 1403 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 BLACEA4D250 179 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 DBX1A6NMT0 343 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 IRS4O14654 1257 aaPredicted RBP7.06□□□□□ -1.28
CDC27-215ENST00000573550 LSAMPQ13449 338 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 KCNA10Q16322 511 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 LONRF2Q1L5Z9 754 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 KCNT2Q6UVM3 1135 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 RSPO2Q6UXX9 243 aaPredicted RBP7.06□□□□□ -1.28
CDC27-215ENST00000573550 RIOX2Q8IUF8 465 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 DCAF4Q8WV16 495 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 PEX11GQ96HA9 241 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 TMEM169Q96HH4 297 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 EXOC2Q96KP1 924 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 LNPKQ9C0E8 428 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 DBR1Q9UK59 544 aaKnown RBP7.06□□□□□ -1.28
CDC27-215ENST00000573550 NUDT5Q9UKK9 219 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 CDK11AQ9UQ88 783 aaPredicted RBP7.06□□□□□ -1.28
CDC27-215ENST00000573550 SIT1Q9Y3P8 196 aa7.06□□□□□ -1.28
CDC27-215ENST00000573550 TRBV23-1A0A0A0MS06 115 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 NPIPB6E9PJ23 425 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 H7BY64 318 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 LINC00310P59036 64 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 FAM209AQ5JX71 171 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 MROH9Q5TGP6 573 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 STYK1Q6J9G0 422 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 ANKLE2Q86XL3 938 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 DCP2Q8IU60 420 aaKnown RBP7.05□□□□□ -1.28
CDC27-215ENST00000573550 SCUBE1Q8IWY4 988 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 TRMT2BQ96GJ1 504 aaKnown RBP7.05□□□□□ -1.28
CDC27-215ENST00000573550 HMGXB3Q12766 1538 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 BIVM-ERCC5R4GMW8 1640 aa7.05□□□□□ -1.28
CDC27-215ENST00000573550 ATAD2BQ9ULI0 1458 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 CEP164Q9UPV0 1460 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 ASXL2Q76L83 1435 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 C6orf222P0C671 652 aaPredicted RBP7.04□□□□□ -1.28
CDC27-215ENST00000573550 IGFBP6P24592 240 aaPredicted RBP7.04□□□□□ -1.28
CDC27-215ENST00000573550 SLC6A11P48066 632 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 NCKAP1LP55160 1127 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 JAG1P78504 1218 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 BMS1Q14692 1282 aaKnown RBP7.04□□□□□ -1.28
CDC27-215ENST00000573550 SSPNQ14714 243 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 C1QL4Q86Z23 238 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 SIGLEC10Q96LC7 697 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 CDC6Q99741 560 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 CLDND1Q9NY35 253 aa7.04□□□□□ -1.28
CDC27-215ENST00000573550 TOP2BQ02880 1626 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 SGSM2O43147 1006 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 ZBTB7AO95365 584 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 ASGR2P07307 311 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 CFPP27918 469 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 SUMO1P63165 101 aaKnown RBP7.03□□□□□ -1.28
CDC27-215ENST00000573550 SLC9A5Q14940 896 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 NFE2L2Q16236 605 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 LBX2Q6XYB7 198 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 TMEFF1Q8IYR6 380 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 LILRB2Q8N423 598 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 KISS1RQ969F8 398 aaPredicted RBP7.03□□□□□ -1.28
CDC27-215ENST00000573550 CHAMP1Q96JM3 812 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 ZFYVE21Q9BQ24 234 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 RNF38Q9H0F5 515 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 BCAS3Q9H6U6 928 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 EPB41L4AQ9HCS5 686 aaPredicted RBP7.03□□□□□ -1.28
CDC27-215ENST00000573550 PPARGC1AQ9UBK2 798 aaKnown RBP7.03□□□□□ -1.28
CDC27-215ENST00000573550 SYNJ1O43426 1573 aa7.03□□□□□ -1.28
CDC27-215ENST00000573550 BUB1BO60566 1050 aaPredicted RBP7.02□□□□□ -1.29
CDC27-215ENST00000573550 PMLP29590 882 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 CCDC144BQ3MJ40 725 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDC27-215ENST00000573550 THAP3Q8WTV1 239 aaPredicted RBP7.02□□□□□ -1.29
CDC27-215ENST00000573550 SEC14L1Q92503 715 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 ALG3Q92685 438 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 TOX2Q96NM4 488 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 DHRS4Q9BTZ2 278 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 AP5M1Q9H0R1 490 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 ZSWIM4Q9H7M6 989 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 CNOT6Q9ULM6 557 aaKnown RBP7.02□□□□□ -1.29
CDC27-215ENST00000573550 COA3Q9Y2R0 106 aaPredicted RBP7.02□□□□□ -1.29
CDC27-215ENST00000573550 MRPS23Q9Y3D9 190 aaKnown RBP7.02□□□□□ -1.29
CDC27-215ENST00000573550 TRAF6Q9Y4K3 522 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 IRAK3Q9Y616 596 aa7.02□□□□□ -1.29
CDC27-215ENST00000573550 ERICH3Q5RHP9 1530 aa7.01□□□□□ -1.29
CDC27-215ENST00000573550 ATF2P15336 505 aa7.01□□□□□ -1.29
CDC27-215ENST00000573550 PI3P19957 117 aa7.01□□□□□ -1.29
CDC27-215ENST00000573550 MC3RP41968 323 aa7.01□□□□□ -1.29
CDC27-215ENST00000573550 GPR85P60893 370 aa7.01□□□□□ -1.29
CDC27-215ENST00000573550 C2orf27AQ580R0 203 aa7.01□□□□□ -1.29
CDC27-215ENST00000573550 ZC3H12BQ5HYM0 836 aaKnown RBP7.01□□□□□ -1.29
CDC27-215ENST00000573550 EPB41L1Q9H4G0 881 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms