RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 CHD4Q14839 1912 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 HTR3EA5X5Y0 456 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 E7EWF7 191 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 WDR46O15213 610 aaKnown RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 SART1O43290 800 aaKnown RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 SUPT3HO75486 399 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 HNRNPCP07910 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 GSTA2P09210 222 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 TOP1P11387 765 aaKnown RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 ATF3P18847 181 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 IL15P40933 162 aaPredicted RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 SLC44A4Q53GD3 710 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 WDR75Q8IWA0 830 aaKnown RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 ANKRD13AQ8IZ07 590 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 ZNF280CQ8ND82 737 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 EHBP1Q8NDI1 1231 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 MRPS27Q92552 414 aaKnown RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 CFAP73A6NFT4 308 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 MATR3P43243 847 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 USP46P62068 366 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 FOXO4P98177 505 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 ITGA7Q13683 1181 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 TAF11Q15544 211 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 PTGISQ16647 500 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 ANKRD20A2Q5SQ80 823 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 ANKRD20A1Q5TYW2 823 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 ANKRD20A3Q5VUR7 823 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 HIBCHQ6NVY1 386 aaPredicted RBP11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 ARHGAP18Q8N392 663 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 FSIP1Q8NA03 581 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 CENPOQ9BU64 300 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 LRRC2Q9BYS8 371 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 OSBPL7Q9BZF2 842 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 JADE2Q9NQC1 790 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 NDUFB9Q9Y6M9 179 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 TTI1O43156 1089 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 SH3BP5O60239 455 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 TOM1O60784 492 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 BBOX1O75936 387 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 CIAO1O76071 339 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 CCDC159P0C7I6 412 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 MYBL1P10243 752 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 HSPD1P10809 573 aaKnown RBP11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 PDIA3P30101 505 aaKnown RBP11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 ME1P48163 572 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 GUCY2FP51841 1108 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 PMS2P54278 862 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 MCCD1P59942 119 aaPredicted RBP11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 ADALQ6DHV7 355 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 LMBR1LQ6UX01 489 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 ATG9AQ7Z3C6 839 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 CCT8L2Q96SF2 557 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 XPO4Q9C0E2 1151 aaKnown RBP11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 FAM192AQ9GZU8 254 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 MAST3O60307 1309 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 MYPNQ86TC9 1320 aa11.53□□□□□ -0.56
CHRNB1-205ENST00000573209 MYH3P11055 1940 aa11.52□□□□□ -0.56
CHRNB1-205ENST00000573209 ABCC12Q96J65 1359 aa11.52□□□□□ -0.56
CHRNB1-205ENST00000573209 BOLA2-SMG1P6H3BVE0 249 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 RNF113AO15541 343 aaKnown RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 MGEA5O60502 916 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 PPP1R37O75864 691 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 CEBPZQ03701 1054 aaKnown RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 KDM7AQ6ZMT4 941 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 AGAP11Q8TF27 550 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 CEP131Q9UPN4 1083 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 SSX2IPQ9Y2D8 614 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 TIMM22Q9Y584 194 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 ACTN4O43707 911 aaKnown RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 YEATS4O95619 227 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 ENDOUP21128 410 aaKnown RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 ZC3H6P61129 1189 aaKnown RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 AKAP17AQ02040 695 aaKnown RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 IFI16Q16666 785 aaKnown RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 FMR1NBQ8N0W7 255 aaPredicted RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 GABPB2Q8TAK5 448 aaPredicted RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 KCNG4Q8TDN1 519 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 NDST4Q9H3R1 872 aa11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 RPAP3Q9H6T3 665 aaPredicted RBP11.52□□□□□ -0.57
CHRNB1-205ENST00000573209 MAP3K13O43283 966 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 CHGBP05060 677 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 GSTA1P08263 222 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 HSPA8P11142 646 aaKnown RBP11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 SP100P23497 879 aaPredicted RBP11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 KLC1Q07866 573 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 PPP1R7Q15435 360 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 ANO7Q6IWH7 933 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 BRINP3Q76B58 766 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 CCDC82Q8N4S0 544 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 AOPEPQ8N6M6 819 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 SYT2Q8N9I0 419 aaPredicted RBP11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 FBXO41Q8TF61 875 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 WDR60Q8WVS4 1066 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 IFT43Q96FT9 208 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 RMND1Q9NWS8 449 aa11.51□□□□□ -0.57
CHRNB1-205ENST00000573209 WDR19Q8NEZ3 1342 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms