RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ZKSCAN3Q9BRR0 538 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 SENP6Q9GZR1 1112 aaPredicted RBP8.73□□□□□ -1.01
NUP88-205ENST00000572809 ZSWIM5Q9P217 1185 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 NRBP1Q9UHY1 535 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 PRR12Q9ULL5 1215 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 WASF2Q9Y6W5 498 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 ZNF536O15090 1300 aa8.73□□□□□ -1.01
NUP88-205ENST00000572809 DNM1LO00429 736 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 ALAS1P13196 640 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 SLC16A2P36021 539 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 GJC2Q5T442 439 aaPredicted RBP8.72□□□□□ -1.01
NUP88-205ENST00000572809 CCDC174Q6PII3 467 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 MAMDC4Q6UXC1 1216 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 BTNL9Q6UXG8 535 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 RASGRP2Q7LDG7 609 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 IQCA1Q86XH1 822 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 EPS8L1Q8TE68 723 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 ANKS1AQ92625 1134 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 ZSCAN10Q96SZ4 725 aaPredicted RBP8.72□□□□□ -1.01
NUP88-205ENST00000572809 KRT23Q9C075 422 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 IL25Q9H293 177 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 ACAD9Q9H845 621 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 CNNM2Q9H8M5 875 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 HOMER2Q9NSB8 354 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 CNPY2Q9Y2B0 182 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 ZNF236Q9UL36 1845 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 PFASO15067 1338 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 NEDD4P46934 1319 aa8.72□□□□□ -1.01
NUP88-205ENST00000572809 FRMPD2Q68DX3 1309 aaPredicted RBP8.72□□□□□ -1.01
NUP88-205ENST00000572809 B4E1Z4 1266 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 SNAI1O95863 264 aaPredicted RBP8.71□□□□□ -1.02
NUP88-205ENST00000572809 ICAM1P05362 532 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 ZNF865P0CJ78 1059 aaPredicted RBP8.71□□□□□ -1.02
NUP88-205ENST00000572809 PDHBP11177 359 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 TAL1P17542 331 aaPredicted RBP8.71□□□□□ -1.02
NUP88-205ENST00000572809 PDE4CQ08493 712 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 VAC14Q08AM6 782 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 ZNF543Q08ER8 600 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 SYDE2Q5VT97 1194 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 C7orf61Q8IZ16 206 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 EHBP1Q8NDI1 1231 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 ZFP42Q96MM3 310 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 RANBP17Q9H2T7 1088 aaKnown RBP8.71□□□□□ -1.02
NUP88-205ENST00000572809 KAT14Q9H8E8 782 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 RNF146Q9NTX7 359 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 FAM184BQ9ULE4 1060 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 CCPG1Q9ULG6 757 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 RAD50Q92878 1312 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 SYNGAP1Q96PV0 1343 aa8.71□□□□□ -1.02
NUP88-205ENST00000572809 KBTBD13C9JR72 458 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 SGSM2O43147 1006 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 SNHG28P0DPA3 235 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 RARBP10826 455 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 AKR1A1P14550 325 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 CNTN2Q02246 1040 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 PTH1RQ03431 593 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 TRDNQ13061 729 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 ACVR2BQ13705 512 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 LRRC41Q15345 812 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 LRRC26Q2I0M4 334 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 MUM1L1Q5H9M0 696 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 GPATCH4Q5T3I0 446 aaKnown RBP8.7□□□□□ -1.02
NUP88-205ENST00000572809 FAM133AQ8N9E0 248 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 ABHD16BQ9H3Z7 469 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 A1CFQ9NQ94 594 aaKnown RBP8.7□□□□□ -1.02
NUP88-205ENST00000572809 XPNPEP3Q9NQH7 507 aa8.7□□□□□ -1.02
NUP88-205ENST00000572809 MKI67P46013 3256 aaKnown RBP8.7□□□□□ -1.02
NUP88-205ENST00000572809 ASB14A6NK59 587 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 PGK1P00558 417 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 CYP21A2P08686 494 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 GOLGA8HP0CJ92 632 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 SYN1P17600 705 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 ADCYAP1R1P41586 468 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 SEMA3FQ13275 785 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 NSMFQ6X4W1 530 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 SLC39A5Q6ZMH5 540 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 CENPQQ7L2Z9 268 aaPredicted RBP8.69□□□□□ -1.02
NUP88-205ENST00000572809 ARMCX2Q7L311 632 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 RNF180Q86T96 592 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 CCDC144CPQ8IYA2 1237 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 ENAHQ8N8S7 591 aaPredicted RBP8.69□□□□□ -1.02
NUP88-205ENST00000572809 MAP4K1Q92918 833 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 FGD4Q96M96 766 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 UBAC1Q9BSL1 405 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 UBA5Q9GZZ9 404 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 ALG2Q9H553 416 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 CYP39A1Q9NYL5 469 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 ZHX1Q9UKY1 873 aaPredicted RBP8.69□□□□□ -1.02
NUP88-205ENST00000572809 PNMA2Q9UL42 364 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 ZMYND8Q9ULU4 1186 aaPredicted RBP8.69□□□□□ -1.02
NUP88-205ENST00000572809 TNKSO95271 1327 aa8.69□□□□□ -1.02
NUP88-205ENST00000572809 PLXNA1Q9UIW2 1896 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 SMCHD1A6NHR9 2005 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 E7EWF7 191 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 PARP1P09874 1014 aaKnown RBP8.68□□□□□ -1.02
NUP88-205ENST00000572809 BAATQ14032 418 aaPredicted RBP8.68□□□□□ -1.02
NUP88-205ENST00000572809 CCDC144BQ3MJ40 725 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
NUP88-205ENST00000572809 PTCRAQ6ISU1 281 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms