RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 P4HA2O15460 535 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 PRODHO43272 600 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 XPOTO43592 962 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 IL2RAP01589 272 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 DNTTP04053 509 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 C6orf222P0C671 652 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 HPDP32754 393 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 SESN3P58005 492 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 PPP2R2AP63151 447 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 HMGN5P82970 282 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 HTRA3P83110 453 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 OCRLQ01968 901 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 TMED1Q13445 227 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 MLECQ14165 292 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 SPARCL1Q14515 664 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 LLGL1Q15334 1064 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 SLC14A2Q15849 920 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 TJAP1Q5JTD0 557 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 ARMC4Q5T2S8 1044 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 PIK3R6Q5UE93 754 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 PEAR1Q5VY43 1037 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 PGBD2Q6P3X8 592 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 ABRAXAS1Q6UWZ7 409 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 MCM10Q7L590 875 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 VASH1Q7L8A9 365 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 MILR1Q7Z6M3 343 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 ZNF295-AS1Q8N0V1 137 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 KRT78Q8N1N4 520 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 MIGA1Q8NAN2 632 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 ZBTB34Q8NCN2 500 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 SMC1BQ8NDV3 1235 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 GRIN3AQ8TCU5 1115 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 SSH3Q8TE77 659 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 KLHL6Q8WZ60 621 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 RADILQ96JH8 1075 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 SDF4Q9BRK5 362 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 NUP62CLQ9H1M0 184 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 SEC31BQ9NQW1 1179 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 LATS2Q9NRM7 1088 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 RAB6BQ9NRW1 208 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 IRAK4Q9NWZ3 460 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 COMMD8Q9NX08 183 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 CDC23Q9UJX2 597 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHB10Q9UN67 800 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 CYP8B1Q9UNU6 501 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 POLHQ9Y253 713 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 INVSQ9Y283 1065 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 POLR3KQ9Y2Y1 108 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 RRP15Q9Y3B9 282 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 H7C0S8 307 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHGA12O60330 932 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 TMEM127O75204 238 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 MAFO75444 373 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PAGE1O75459 146 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 SKAP2O75563 359 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 TBC1D8O95759 1140 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 CSTBP04080 98 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PARP1P09874 1014 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 AKR1B1P15121 316 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 STMN1P16949 149 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 XBP1P17861 261 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 ABCB4P21439 1286 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 INPP5BP32019 993 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 NPTX2P47972 431 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 LSSP48449 732 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 UBASH3AP57075 661 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 RPL6Q02878 288 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 IFT88Q13099 833 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 ZNF267Q14586 743 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 SLMAPQ14BN4 828 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 ZYXQ15942 572 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 MEA1Q16626 185 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 ANO4Q32M45 955 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 GNPTABQ3T906 1256 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 ATAT1Q5SQI0 421 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 IZUMO3Q5VZ72 239 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 IQCA1Q86XH1 822 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 VSIG1Q86XK7 387 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 GALNT13Q8IUC8 556 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 CCNJLQ8IV13 435 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 ESX1Q8N693 406 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 RHPN1Q8TCX5 695 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 CNKSR1Q969H4 720 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 OSBP2Q969R2 916 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 TRIM11Q96F44 468 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 SCLYQ96I15 445 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 SPATA17Q96L03 361 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PPP1R16BQ96T49 567 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 TCF12Q99081 682 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 ACO2Q99798 780 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 NCAPGQ9BPX3 1015 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 TMEM60Q9H2L4 133 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 SMOC1Q9H4F8 434 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 CERS4Q9HA82 394 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 VTA1Q9NP79 307 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PRDM9Q9NQV7 894 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 ITM2CQ9NQX7 267 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 DIAPH3Q9NSV4 1193 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 OLA1Q9NTK5 396 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms