RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 CTNNB1P35222 781 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 NDUFV1P49821 464 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
CCDC40-208ENST00000572270 C7orf31Q8N865 590 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 IGFLR1Q9H665 355 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 PAG1Q9NWQ8 432 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 GTF2IRD1Q9UHL9 959 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 TNNQ9UQP3 1299 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 CACNA1HO95180 2353 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 LOC730098B7Z3J9 87 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 UPP2O95045 317 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 SNAP25P60880 206 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 PTK7Q13308 1070 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 SBK1Q52WX2 424 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 ZNF618Q5T7W0 954 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 DBF4BQ8NFT6 615 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 CHMP4CQ96CF2 233 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 GMCL1Q96IK5 515 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 C11orf84Q9BUA3 381 aaPredicted RBP15.5■□□□□ 0.07
CCDC40-208ENST00000572270 IL1RAPL2Q9NP60 686 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 EXOC6BQ9Y2D4 811 aa15.5■□□□□ 0.07
CCDC40-208ENST00000572270 GALR2O43603 387 aaPredicted RBP15.49■□□□□ 0.07
CCDC40-208ENST00000572270 PLA2G6O60733 806 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 MMP3P08254 477 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 NBL1P41271 181 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 UBE3CQ15386 1083 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 TMEM57Q8N5G2 664 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 PPP2R3CQ969Q6 453 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 ASIC4Q96FT7 647 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 KATNAL1Q9BW62 490 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 HDAC6Q9UBN7 1215 aa15.49■□□□□ 0.07
CCDC40-208ENST00000572270 B4DLN1 442 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 PRDM1O75626 825 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 CSPG5O95196 566 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 EYA4O95677 639 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 ICAM1P05362 532 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 RB1P06400 928 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 TSPY3P0CV98 308 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 TSPY8P0CW00 308 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
CCDC40-208ENST00000572270 MCCP23508 829 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 CALML3P27482 149 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 MRPL12P52815 198 aaKnown RBP15.48■□□□□ 0.07
CCDC40-208ENST00000572270 MBTPS1Q14703 1052 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 KCTD1Q719H9 257 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 AFG1LQ8WV93 481 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 NKD2Q969F2 451 aaPredicted RBP15.48■□□□□ 0.07
CCDC40-208ENST00000572270 TOP1MTQ969P6 601 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 PRR12Q9ULL5 1215 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 RWDD3Q9Y3V2 267 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 MYO7AQ13402 2215 aa15.48■□□□□ 0.07
CCDC40-208ENST00000572270 C5orf67F2Z3F1 127 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 LINC01565O15544 149 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 IFIT2P09913 472 aaKnown RBP15.47■□□□□ 0.07
CCDC40-208ENST00000572270 GTF2F1P35269 517 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC40-208ENST00000572270 CBX2Q14781 532 aaPredicted RBP15.47■□□□□ 0.07
CCDC40-208ENST00000572270 HSP90AB4PQ58FF6 505 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 MCTP2Q6DN12 878 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 ZSCAN25Q6NSZ9 544 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 TRAF7Q6Q0C0 670 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 CLASRPQ8N2M8 674 aaKnown RBP15.47■□□□□ 0.07
CCDC40-208ENST00000572270 FIBCD1Q8N539 461 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 ALG1Q9BT22 464 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 IFIH1Q9BYX4 1025 aaKnown RBP15.47■□□□□ 0.07
CCDC40-208ENST00000572270 VPS13AQ96RL7 3174 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 PLIN4Q96Q06 1357 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 DMDP11532 3685 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 FAM186AA6NE01 2351 aa15.47■□□□□ 0.07
CCDC40-208ENST00000572270 NFIBO00712 420 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 GRM6O15303 877 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 GH1P01241 217 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 ADAM15Q13444 863 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 DGKDQ16760 1214 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 TRIM71Q2Q1W2 868 aaKnown RBP15.46■□□□□ 0.07
CCDC40-208ENST00000572270 PLEKHG4Q58EX7 1191 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 GIMAP6Q6P9H5 292 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 SLC30A10Q6XR72 485 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 ADSSL1Q8N142 457 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 SEPT8Q92599 483 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 KAT2BQ92831 832 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 MSLNLQ96KJ4 702 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 PUS7LQ9H0K6 701 aaKnown RBP15.46■□□□□ 0.07
CCDC40-208ENST00000572270 INCENPQ9NQS7 918 aa15.46■□□□□ 0.07
CCDC40-208ENST00000572270 RSPH10B2B2RC85 870 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 ARIH2O95376 493 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 CHGBP05060 677 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 RSPH10BP0C881 870 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 EDNRBP24530 442 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 THPOP40225 353 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 PSEN2P49810 448 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 RRP1P56182 461 aaKnown RBP15.45■□□□□ 0.06
CCDC40-208ENST00000572270 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 RCSD1Q6JBY9 416 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 RNF207Q6ZRF8 634 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 CHST3Q7LGC8 479 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 ZBTB33Q86T24 672 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 DHX37Q8IY37 1157 aaKnown RBP15.45■□□□□ 0.06
CCDC40-208ENST00000572270 SMRP1Q8NCR6 262 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 DNERQ8NFT8 737 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 RHPN1Q8TCX5 695 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms